RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 CDK13Q14004 1512 aaKnown RBP8.87□□□□□ -0.99
HMGB4-204ENST00000522796 PCDH11XQ9BZA7 1347 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 GOLGA8JA6NMD2 632 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 LACTBL1A8MY62 500 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 YKT6O15498 198 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 ADCY3O60266 1144 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 TRPA1O75762 1119 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 ZKSCAN1P17029 563 aaPredicted RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 IL32P24001 234 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 GNA11P29992 359 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 EPS15P42566 896 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 PPP2R2AP63151 447 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 RELQ04864 619 aaPredicted RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 RUNX1T1Q06455 604 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 MTERF2Q49AM1 385 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 ZC2HC1CQ53FD0 456 aaPredicted RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 HSP90AA5PQ58FG0 334 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 BTN2A1Q7KYR7 527 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 PROSER2Q86WR7 435 aaPredicted RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 ST13P4Q8IZP2 240 aaPredicted RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 FMR1NBQ8N0W7 255 aaPredicted RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 USHBP1Q8N6Y0 703 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 CDC26Q8NHZ8 85 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SLC22A8Q8TCC7 542 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 NELFBQ8WX92 580 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 STON2Q8WXE9 905 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 ATL1Q8WXF7 558 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 INTS12Q96CB8 462 aaKnown RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SEPT11Q9NVA2 429 aaKnown RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 THAP1Q9NVV9 213 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 GID8Q9NWU2 228 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SAMD15Q9P1V8 674 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 ZNHIT2Q9UHR6 403 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 DSEQ9UL01 958 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 PCDHB6Q9Y5E3 794 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 A0A0U1RQJ8 604 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 A6NCN8 305 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 CCNT1O60563 726 aaKnown RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 EPN2O95208 641 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 PRKACAP17612 351 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 CBX5P45973 191 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 NLRP6P59044 892 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 ST3GAL1Q11201 340 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SEMA3AQ14563 771 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 EZH2Q15910 746 aaKnown RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SLC10A5Q5PT55 438 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 DBX2Q6ZNG2 339 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 UNC13DQ70J99 1090 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 ANKMY2Q8IV38 441 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 PBKQ96KB5 322 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SHCBP1LQ9BZQ2 653 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 CNOT10Q9H9A5 744 aaKnown RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 DDX43Q9NXZ2 648 aaKnown RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SELENONQ9NZV5 590 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 RCOR1Q9UKL0 485 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SNX14Q9Y5W7 946 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 SETD1AO15047 1707 aaKnown RBP8.86□□□□□ -0.99
HMGB4-204ENST00000522796 KNDC1Q76NI1 1749 aa8.86□□□□□ -0.99
HMGB4-204ENST00000522796 PDS5AQ29RF7 1337 aaKnown RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 E9PMD0 336 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 EXTL3O43909 919 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 DDHD2O94830 711 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 NAGAP17050 411 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 SCNN1DP51172 638 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 VAV2P52735 878 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 WASHC2DQ5SRD0 308 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 ZNF572Q7Z3I7 529 aaPredicted RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 PTCD2Q8WV60 388 aaKnown RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 DGCR14Q96DF8 476 aaKnown RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 ACAP3Q96P50 834 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 NUDCD1Q96RS6 583 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 SDF4Q9BRK5 362 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 STK33Q9BYT3 514 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 C12orf4Q9NQ89 552 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 C8orf4Q9NR00 106 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 STX8Q9UNK0 236 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 PA2G4Q9UQ80 394 aaKnown RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 DNAJC16Q9Y2G8 782 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 PRKAB1Q9Y478 270 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 CCDC163A0A0D9SF12 145 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 GCOM1H8Y6P7 765 aaPredicted RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 PIK3CDO00329 1044 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 NDC80O14777 642 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 ECE2O60344 883 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 CNOT3O75175 753 aaKnown RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 OR5F1O95221 314 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 CRYZL1O95825 349 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 ENO2P09104 434 aaPredicted RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 MYZAPP0CAP1 466 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 PABPC1P11940 636 aaKnown RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 CCNB1P14635 433 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 RXRAP19793 462 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 FECHP22830 423 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 CFL1P23528 166 aaKnown RBP8.85□□□□□ -0.99
HMGB4-204ENST00000522796 GTF2H1P32780 548 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 PRCPP42785 496 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 GSSP48637 474 aa8.85□□□□□ -0.99
HMGB4-204ENST00000522796 RALGDSQ12967 914 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms