RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 POLR3FQ9H1D9 316 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 UPF3AQ9H1J1 476 aaKnown RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 TUT1Q9H6E5 874 aaKnown RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 TMEM206Q9H813 350 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 ARHGAP28Q9P2N2 729 aa10.48□□□□□ -0.73
SHPRH-209ENST00000521977 ZNF215Q9UL58 517 aaPredicted RBP10.48□□□□□ -0.73
SHPRH-209ENST00000521977 SIP14410 1827 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 H0YCG3 227 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 HAS3O00219 553 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 SLC16A4O15374 487 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 SEPT4O43236 478 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 FKTNO75072 461 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 C22orf31O95567 290 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 F2P00734 622 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 INSRRP14616 1297 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 GLRA2P23416 452 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 PBX1P40424 430 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 NAMPTP43490 491 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 CPT1AP50416 773 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 COPB1P53618 953 aaKnown RBP10.47□□□□□ -0.73
SHPRH-209ENST00000521977 GJA9P57773 515 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 SNRPFP62306 86 aaKnown RBP10.47□□□□□ -0.73
SHPRH-209ENST00000521977 TBC1D8BQ0IIM8 1120 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 TRIM32Q13049 653 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 MYBPC2Q14324 1141 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 IER5Q5VY09 327 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 SLC9A9Q8IVB4 645 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 MAP4K3Q8IVH8 894 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 KSR1Q8IVT5 923 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 C12orf56Q8IXR9 622 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 ASAP3Q8TDY4 903 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 PXYLP1Q8TE99 480 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 TCP11Q8WWU5 503 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 KAT2BQ92831 832 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 TMEM143Q96AN5 459 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 IFT74Q96LB3 600 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 CNOT6LQ96LI5 555 aaKnown RBP10.47□□□□□ -0.73
SHPRH-209ENST00000521977 ACCSQ96QU6 501 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 AP5M1Q9H0R1 490 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 GBP3Q9H0R5 595 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 KMT5AQ9NQR1 393 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 DMAC2Q9NW81 257 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 CGNQ9P2M7 1197 aaKnown RBP10.47□□□□□ -0.73
SHPRH-209ENST00000521977 ADGRA3Q8IWK6 1321 aa10.47□□□□□ -0.73
SHPRH-209ENST00000521977 CETN3O15182 167 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 MAGEB2O15479 319 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 GNA14O95837 355 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 PRMT2P55345 433 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 DRP2Q13474 957 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 CAPSQ13938 189 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 PPP2R5AQ15172 486 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 TAS1R3Q7RTX0 852 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 VSTM4Q8IW00 320 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 ANKRD20A12PQ8NF67 263 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 GOLGA5Q8TBA6 731 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 ZNF296Q8WUU4 475 aaPredicted RBP10.46□□□□□ -0.73
SHPRH-209ENST00000521977 TUBGCP2Q9BSJ2 902 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 IKZF4Q9H2S9 585 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 AGPAT3Q9NRZ7 376 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 MAGEC2Q9UBF1 373 aaPredicted RBP10.46□□□□□ -0.73
SHPRH-209ENST00000521977 TBX20Q9UMR3 447 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 PCDHGA10Q9Y5H3 936 aa10.46□□□□□ -0.73
SHPRH-209ENST00000521977 DENND3A2RUS2 1198 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 RRN3P2A6NIE6 340 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 CCDC169A6NNP5 214 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 LGALS16A8MUM7 142 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 SLC16A3O15427 465 aaKnown RBP10.45□□□□□ -0.74
SHPRH-209ENST00000521977 ASAP2O43150 1006 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 TEX33O43247 280 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 ADCY3O60266 1144 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 KPNA6O60684 536 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 PIGRP01833 764 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 HMGCRP04035 888 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 NR3C1P04150 777 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 TPM3P06753 285 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 ELNP15502 786 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 HSPA6P17066 643 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 NR2F2P24468 414 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 RPL13P26373 211 aaKnown RBP10.45□□□□□ -0.74
SHPRH-209ENST00000521977 KLRC1P26715 233 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 HOXC8P31273 242 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 MCCD1P59942 119 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-209ENST00000521977 MAP2K1Q02750 393 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-209ENST00000521977 POU5F1BQ06416 359 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 ADAM9Q13443 819 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 MXD4Q14582 209 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-209ENST00000521977 ARHGEF6Q15052 776 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 GRIK4Q16099 956 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 FSCN1Q16658 493 aaKnown RBP10.45□□□□□ -0.74
SHPRH-209ENST00000521977 FILIP1LQ4L180 1135 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 HS1BP3Q53T59 392 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 BRDTQ58F21 947 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-209ENST00000521977 MIIPQ5JXC2 388 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 MARCH8Q5T0T0 291 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 CDCA2Q69YH5 1023 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-209ENST00000521977 EFCAB12Q6NXP0 572 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 HS2ST1Q7LGA3 356 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 FRMD5Q7Z6J6 570 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 LRRC71Q8N4P6 559 aa10.45□□□□□ -0.74
SHPRH-209ENST00000521977 RETREG2Q8NC44 543 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms