RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 UBA7P41226 1012 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 MAPK7Q13164 816 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 PIAS4Q8N2W9 510 aaPredicted RBP10.48□□□□□ -0.73
CLK4-209ENST00000521621 RAD54LQ92698 747 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 PGBD4Q96DM1 585 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 MRPL9Q9BYD2 267 aaKnown RBP10.48□□□□□ -0.73
CLK4-209ENST00000521621 BHMT2Q9H2M3 363 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 A0A1B0GUA9 196 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 TSPAN1O60635 241 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 CA3P07451 260 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 HSP90AA1P07900 732 aaKnown RBP10.48□□□□□ -0.73
CLK4-209ENST00000521621 UBE3AQ05086 875 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 NCBP1Q09161 790 aaKnown RBP10.48□□□□□ -0.73
CLK4-209ENST00000521621 UBXN11Q5T124 520 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 ZBTB8OSQ8IWT0 167 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 RNF149Q8NC42 400 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 CDX2Q99626 313 aaPredicted RBP10.48□□□□□ -0.73
CLK4-209ENST00000521621 BLOC1S4Q9NUP1 217 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 ARHGAP28Q9P2N2 729 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 LZTS1Q9Y250 596 aa10.48□□□□□ -0.73
CLK4-209ENST00000521621 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.48□□□□□ -0.73
CLK4-209ENST00000521621 H3BNC9 293 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 TXLNAP40222 546 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 RABGGTBP53611 331 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 NOTUMQ6P988 496 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 DAW1Q8N136 415 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 FIBCD1Q8N539 461 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 IFT74Q96LB3 600 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 ZBED2Q9BTP6 218 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 LRRC27Q9C0I9 530 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 CSRNP2Q9H175 543 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 E9PMD0 336 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 ACKR2O00590 384 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 N4BP3O15049 544 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 SPTLC2O15270 562 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 USO1O60763 962 aaKnown RBP10.47□□□□□ -0.73
CLK4-209ENST00000521621 POU5F1Q01860 360 aaKnown RBP10.47□□□□□ -0.73
CLK4-209ENST00000521621 COL19A1Q14993 1142 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 CCDC73Q6ZRK6 1079 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 KCNK18Q7Z418 384 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 APBB1IPQ7Z5R6 666 aaPredicted RBP10.47□□□□□ -0.73
CLK4-209ENST00000521621 MYOCDQ8IZQ8 938 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 HVCN1Q96D96 273 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 CDK5RAP3Q96JB5 506 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 CASD1Q96PB1 797 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 TSPAN18Q96SJ8 248 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 YME1L1Q96TA2 773 aa10.47□□□□□ -0.73
CLK4-209ENST00000521621 PP2D1A8MPX8 630 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 PLS3P13797 630 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 ATF7P17544 494 aaPredicted RBP10.46□□□□□ -0.73
CLK4-209ENST00000521621 BMPR1AP36894 532 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 NCKAP1LP55160 1127 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 NUCB2P80303 420 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 PDE12Q6L8Q7 609 aaKnown RBP10.46□□□□□ -0.73
CLK4-209ENST00000521621 CATSPER4Q7RTX7 472 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 NLRP4Q96MN2 994 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 MINDY3Q9H8M7 445 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 FAM105AQ9NUU6 356 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 SEL1LQ9UBV2 794 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 USP25Q9UHP3 1055 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 LRFN2Q9ULH4 789 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 CIZ1Q9ULV3 898 aaPredicted RBP10.46□□□□□ -0.73
CLK4-209ENST00000521621 ZDHHC9Q9Y397 364 aa10.46□□□□□ -0.73
CLK4-209ENST00000521621 FSD2A1L4K1 749 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 FRMD3A2A2Y4 597 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 PIGRP01833 764 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 NFX1Q12986 1120 aaKnown RBP10.46□□□□□ -0.74
CLK4-209ENST00000521621 GRIN2CQ14957 1233 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 ARSHQ5FYA8 562 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 AXDND1Q5T1B0 1012 aaPredicted RBP10.46□□□□□ -0.74
CLK4-209ENST00000521621 KSR1Q8IVT5 923 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 TMEM192Q8IY95 271 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 LARP4BQ92615 738 aaKnown RBP10.46□□□□□ -0.74
CLK4-209ENST00000521621 AAASQ9NRG9 546 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 KANSL3Q9P2N6 904 aa10.46□□□□□ -0.74
CLK4-209ENST00000521621 LPXNO60711 386 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 C1RP00736 705 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 PLCG1P19174 1290 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 STK38Q15208 465 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 DCAF4L1Q3SXM0 396 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 FAM102BQ5T8I3 360 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 SLC27A1Q6PCB7 646 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 GPR65Q8IYL9 337 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 HACE1Q8IYU2 909 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 LRRC43Q8N309 656 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 BSNDQ8WZ55 320 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 SCLT1Q96NL6 688 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 GAS2L1Q99501 681 aaPredicted RBP10.45□□□□□ -0.74
CLK4-209ENST00000521621 TMEM175Q9BSA9 504 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 RUSC1Q9BVN2 902 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 TNFSF13BQ9Y275 285 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 GIT1Q9Y2X7 761 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 LCHNA4D1U4 455 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 HIP1RO75146 1068 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 ERLIN2O94905 339 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 SRGAP2CP0DJJ0 459 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 MYOGP15173 224 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 LAG3P18627 525 aa10.45□□□□□ -0.74
CLK4-209ENST00000521621 PROZP22891 400 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms