RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 POP1Q99575 1024 aaKnown RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 CDCA3Q99618 268 aaPredicted RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 IFT122Q9HBG6 1241 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 ENTPD7Q9NQZ7 604 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 PUF60Q9UHX1 559 aaKnown RBP11.98□□□□□ -0.49
PVT1-209ENST00000520913 CD207Q9UJ71 328 aa11.98□□□□□ -0.49
PVT1-209ENST00000520913 POTEMA6NI47 508 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 FSCN2O14926 492 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 DGAT1O75907 488 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 SLITRK3O94933 977 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 GLP2RO95838 553 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 SRGAP2BP0DMP2 458 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 MCM7P33993 719 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 PBX3P40426 434 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 TXKP42681 527 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 KRT17Q04695 432 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 ZP2Q05996 745 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 GNL2Q13823 731 aaKnown RBP11.97□□□□□ -0.49
PVT1-209ENST00000520913 MXD4Q14582 209 aaPredicted RBP11.97□□□□□ -0.49
PVT1-209ENST00000520913 PLPP4Q5VZY2 271 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 GLB1LQ6UWU2 654 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 RBM23Q86U06 439 aaKnown RBP11.97□□□□□ -0.49
PVT1-209ENST00000520913 FERMT3Q86UX7 667 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 ADHFE1Q8IWW8 467 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 FAM184AQ8NB25 1140 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 RNF149Q8NC42 400 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 MICAL1Q8TDZ2 1067 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 PGBD4Q96DM1 585 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 MSLNLQ96KJ4 702 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 FOXP1Q9H334 677 aaPredicted RBP11.97□□□□□ -0.49
PVT1-209ENST00000520913 TLE6Q9H808 572 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 ANKEF1Q9NU02 776 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 SPG21Q9NZD8 308 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 PCDHGC5Q9Y5F6 944 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 PLXNA3P51805 1871 aa11.97□□□□□ -0.49
PVT1-209ENST00000520913 C2orf16Q68DN1 1984 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 CNTNAP2Q9UHC6 1331 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 ZNF623O75123 536 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 ZC3H11AO75152 810 aaKnown RBP eCLIP11.96□□□□□ -0.49
PVT1-209ENST00000520913 ERLIN2O94905 339 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 SRGAP2CP0DJJ0 459 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 RBM25P49756 843 aaKnown RBP11.96□□□□□ -0.49
PVT1-209ENST00000520913 RARRES1P49788 294 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 ERVFC1P60507 584 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 TFDP1Q14186 410 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 PCBP1Q15365 356 aaKnown RBP eCLIP11.96□□□□□ -0.49
PVT1-209ENST00000520913 DUSP6Q16828 381 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 SLC39A11Q8N1S5 342 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 SMRP1Q8NCR6 262 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 KHSRPQ92945 711 aaKnown RBP eCLIP11.96□□□□□ -0.49
PVT1-209ENST00000520913 LPPQ93052 612 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 KIF2CQ99661 725 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 HSD17B14Q9BPX1 270 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 TCF25Q9BQ70 676 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 TMEM60Q9H2L4 133 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 MINDY3Q9H8M7 445 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 NGRNQ9NPE2 291 aaKnown RBP11.96□□□□□ -0.49
PVT1-209ENST00000520913 CD320Q9NPF0 282 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 XPNPEP1Q9NQW7 623 aa11.96□□□□□ -0.49
PVT1-209ENST00000520913 BARX2Q9UMQ3 279 aaPredicted RBP11.96□□□□□ -0.49
PVT1-209ENST00000520913 ZBTB39O15060 712 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 EYA4O95677 639 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 OR52Z1P0C646 297 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 ATP2B1P20020 1258 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 COL9A1P20849 921 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 AXLP30530 894 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 ALDH7A1P49419 539 aaKnown RBP11.95□□□□□ -0.5
PVT1-209ENST00000520913 BCAR1P56945 870 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 RNASELQ05823 741 aaKnown RBP11.95□□□□□ -0.5
PVT1-209ENST00000520913 COASYQ13057 564 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 CAPSQ13938 189 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 SMC1AQ14683 1233 aaKnown RBP11.95□□□□□ -0.5
PVT1-209ENST00000520913 NOMO2Q5JPE7 1267 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 TMC7Q7Z402 723 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 IFNLR1Q8IU57 520 aaPredicted RBP11.95□□□□□ -0.5
PVT1-209ENST00000520913 NOSTRINQ8IVI9 506 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 FBXO18Q8NFZ0 1043 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 ERMNQ8TAM6 284 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 URGCPQ8TCY9 931 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 TMEM169Q96HH4 297 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 TUFT1Q9NNX1 390 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 TBC1D13Q9NVG8 400 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 CLEC1BQ9P126 229 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 NOL7Q9UMY1 257 aaKnown RBP11.95□□□□□ -0.5
PVT1-209ENST00000520913 INPP5FQ9Y2H2 1132 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 TRIP11Q15643 1979 aa11.95□□□□□ -0.5
PVT1-209ENST00000520913 MTCL1Q9Y4B5 1905 aaKnown RBP11.95□□□□□ -0.5
PVT1-209ENST00000520913 PDCD11Q14690 1871 aaKnown RBP11.95□□□□□ -0.5
PVT1-209ENST00000520913 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 PI4K2BG5E9Z4 385 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 ST18O60284 1047 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 USO1O60763 962 aaKnown RBP11.94□□□□□ -0.5
PVT1-209ENST00000520913 TRAPPC10P48553 1259 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 PTENP60484 403 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 POU5F1BQ06416 359 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 RABEP1Q15276 862 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 LONRF3Q496Y0 759 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 TMEM31Q5JXX7 168 aa11.94□□□□□ -0.5
PVT1-209ENST00000520913 TTC38Q5R3I4 469 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms