RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 GPATCH4Q5T3I0 446 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 CFAP58Q5T655 872 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 OLFML2BQ68BL8 750 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 HAUS3Q68CZ6 603 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 LRRC31Q6UY01 552 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 TMEM179Q6ZVK1 233 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 VPS36Q86VN1 386 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 CREG2Q8IUH2 290 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 MREGQ8N565 214 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 ARFGAP2Q8N6H7 521 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 C1orf131Q8NDD1 294 aaKnown RBP9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 ERMNQ8TAM6 284 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 TRIM43Q96BQ3 446 aaPredicted RBP9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 MAML3Q96JK9 1138 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 MTMR9Q96QG7 549 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 MMP19Q99542 508 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 SH3GL2Q99962 352 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 CAPS2Q9BXY5 557 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 SEMA6BQ9H3T3 888 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 RIOX1Q9H6W3 641 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 XPNPEP3Q9NQH7 507 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 PDLIM7Q9NR12 457 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 FBXO28Q9NVF7 368 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 TMEM51Q9NW97 253 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 ARHGAP20Q9P2F6 1191 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 DAAM1Q9Y4D1 1078 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 CAPN6Q9Y6Q1 641 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 RLFQ13129 1914 aa9.42□□□□□ -0.9
CTNNA1-223ENST00000520520 COL11A1P12107 1806 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 A0A087WUV0 522 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 MYMKA6NI61 221 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 EIF3HO15372 352 aaKnown RBP eCLIP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 ZEB2O60315 1214 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 CPP00450 1065 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 RARBP10826 455 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 FOSL2P15408 326 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 TAL1P17542 331 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 NOVP48745 357 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 KLK7P49862 253 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 SKOR1P84550 965 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 CYP27A1Q02318 531 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 TLE2Q04725 743 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 GABPAQ06546 454 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 TMEM132BQ14DG7 1078 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 EDRF1Q3B7T1 1238 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 FAM109BQ6ICB4 259 aaPredicted RBP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 LRRC55Q6ZSA7 311 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 KCTD17Q8N5Z5 321 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 PTCD2Q8WV60 388 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 LMBR1Q8WVP7 490 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 BAP1Q92560 729 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 RNPC3Q96LT9 517 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 DRC1Q96MC2 740 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 PIGSQ96S52 555 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 MMTAG2Q9BU76 263 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 LSM14BQ9BX40 385 aaKnown RBP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 MROH8Q9H579 483 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 MTMR7Q9Y216 660 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 A0A0G2JMZ2 1700 aa9.41□□□□□ -0.9
CTNNA1-223ENST00000520520 ZNF236Q9UL36 1845 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 PNMA6FA0A0J9YX94 578 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 RCCD1A6NED2 376 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 HMGB1P1B2RPK0 211 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 CETN3O15182 167 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 KRT18P05783 430 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 GOLGA8HP0CJ92 632 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 EEF2P13639 858 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 RAG1P15918 1043 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 ITGB8P26012 769 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 SETQ01105 290 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 COASYQ13057 564 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 MTMR3Q13615 1198 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 CUL1Q13616 776 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 KCTD2Q14681 263 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 NAB2Q15742 525 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 HYIQ5T013 277 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 FAM83BQ5T0W9 1011 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 MOXD1Q6UVY6 613 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 SLFN12Q8IYM2 578 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 SYCE1Q8N0S2 351 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 SHCBP1Q8NEM2 672 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 DDX12PQ92771 950 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 LRRC45Q96CN5 670 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 PBKQ96KB5 322 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 TRERF1Q96PN7 1200 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 PNMA5Q96PV4 448 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 TTYH1Q9H313 450 aaPredicted RBP9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 VCPKMTQ9H867 229 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 MLXIPQ9HAP2 919 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 BLOC1S4Q9NUP1 217 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 PANK4Q9NVE7 773 aa9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 DDX25Q9UHL0 483 aaKnown RBP9.4□□□□□ -0.9
CTNNA1-223ENST00000520520 MYH7BA7E2Y1 1941 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 A0A1W2PQ45 241 aaPredicted RBP9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 A0A1W2PQY0 241 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 CCDC188H7C350 402 aa9.39□□□□□ -0.91
CTNNA1-223ENST00000520520 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms