RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 ATRNL1Q5VV63 1379 aa5.59□□□□□ -1.52
SDC2-204ENST00000519914 RBBP6Q7Z6E9 1792 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 PITPNM2Q9BZ72 1349 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 SSU72P8A0A1W2PR75 194 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 CTAGE15A4D2H0 777 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 RBAK-RBAKDNI3L0D1 243 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 ZBTB5O15062 677 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 TBX3O15119 743 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 DDX3YO15523 660 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 SLC37A4O43826 429 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 GNA14O95837 355 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 TGFB1P01137 390 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 IGLV1-40P01703 118 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 CTAGE8P0CG41 777 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 GOLGA8HP0CJ92 632 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 AKR1B1P15121 316 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 NPR1P16066 1061 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 MCM3P25205 808 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 CD68P34810 354 aaPredicted RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 USP11P51784 963 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 VAV2P52735 878 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 MRPL12P52815 198 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 CKAP4Q07065 602 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 AP3B2Q13367 1082 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 LONRF2Q1L5Z9 754 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 ASTE1Q2TB18 679 aaPredicted RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 KIF4BQ2VIQ3 1234 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 VWA3BQ502W6 1294 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 TEX35Q5T0J7 233 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 APOBEC3HQ6NTF7 200 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 ADAMTSL4Q6UY14 1074 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 CTAGE6Q86UF2 777 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 CCDC84Q86UT8 332 aaPredicted RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 CTAGE4Q8IX94 777 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 CERS5Q8N5B7 392 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 OR13H1Q8NG92 308 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 STK32AQ8WU08 396 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 HAS1Q92839 578 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 CUL5Q93034 780 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 ZDHHC15Q96MV8 337 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 GPR101Q96P66 508 aaPredicted RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 SLF1Q9BQI6 1058 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 NT5C3AQ9H0P0 336 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 MUC3BQ9H195 1237 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 DHX36Q9H2U1 1008 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 VIPAS39Q9H9C1 493 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 SRA1Q9HD15 236 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 LZTFL1Q9NQ48 299 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 DDX4Q9NQI0 724 aaKnown RBP5.58□□□□□ -1.52
SDC2-204ENST00000519914 NYAP2Q9P242 653 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 LRWD1Q9UFC0 647 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 SERPINB13Q9UIV8 391 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 MYO6Q9UM54 1294 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 L1RE1Q9UN81 338 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 PCDHA2Q9Y5H9 948 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 SLX4Q8IY92 1834 aa5.58□□□□□ -1.52
SDC2-204ENST00000519914 B4DLN1 442 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 TNFRSF10BO14763 440 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 NPHP1O15259 732 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 DHX15O43143 795 aaKnown RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 KRT86O43790 486 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 PPP1R11O60927 126 aaPredicted RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 ERLIN1O75477 346 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 SMNDC1O75940 238 aaKnown RBP eCLIP5.57□□□□□ -1.52
SDC2-204ENST00000519914 TDP2O95551 362 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 HLA-DOAP06340 250 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 FCER1AP12319 257 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 HOXD8P13378 290 aaPredicted RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 ALDH1B1P30837 517 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 CIITAP33076 1130 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 CYP2C19P33261 490 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 TECP42680 631 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 USP14P54578 494 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 OCLNQ16625 522 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 Q4G0T1 1027 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 FKBP15Q5T1M5 1219 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 KRT79Q5XKE5 535 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 CDC42EP5Q6NZY7 148 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 TATDN1Q6P1N9 297 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 BTNL9Q6UXG8 535 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 DPP8Q6V1X1 898 aaPredicted RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 ADGRF4Q8IZF3 695 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 ARMC10Q8N2F6 343 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 TXLNBQ8N3L3 684 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 GMCL1P1Q8NEA9 526 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 RASSF8Q8NHQ8 419 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 CPLX3Q8WVH0 158 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 NOC4LQ9BVI4 516 aaKnown RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 UBA5Q9GZZ9 404 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 NDST4Q9H3R1 872 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 NHEJ1Q9H9Q4 299 aaPredicted RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 PRDM10Q9NQV6 1147 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 BIN2Q9UBW5 565 aaPredicted RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 DDX25Q9UHL0 483 aaKnown RBP5.57□□□□□ -1.52
SDC2-204ENST00000519914 ZMIZ1Q9ULJ6 1067 aa5.57□□□□□ -1.52
SDC2-204ENST00000519914 AFF2P51816 1311 aa5.56□□□□□ -1.52
SDC2-204ENST00000519914 BTNL10A8MVZ5 291 aa5.56□□□□□ -1.52
SDC2-204ENST00000519914 ZBTB39O15060 712 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms