RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SLC9A7Q96T83 725 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 NKX2-4Q9H2Z4 354 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 DHX33Q9H6R0 707 aaKnown RBP8.41□□□□□ -1.06
SDCBP-206ENST00000519115 TUFT1Q9NNX1 390 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 SUCLA2Q9P2R7 463 aaPredicted RBP8.41□□□□□ -1.06
SDCBP-206ENST00000519115 DACH1Q9UI36 760 aa8.41□□□□□ -1.06
SDCBP-206ENST00000519115 NOC2LQ9Y3T9 749 aaKnown RBP8.41□□□□□ -1.06
SDCBP-206ENST00000519115 FNDC1Q4ZHG4 1894 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 IGKV6-21A0A0C4DH24 114 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 SYCE3A1L190 88 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 GTPBP6O43824 516 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 EFCAB14O75071 495 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 CSDE1O75534 798 aaKnown RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 RPS6KA5O75582 802 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 UPP2O95045 317 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 FGFR4P22455 802 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 RFC5P40937 340 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 RARRES1P49788 294 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 DNM2P50570 870 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 GPC3P51654 580 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 CRYBB1P53674 252 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 NLRP12P59046 1061 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 GRIN1Q05586 938 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 PSMD2Q13200 908 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 RAB30Q15771 203 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 ECM1Q16610 540 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 STX1AQ16623 288 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 TMEM119Q4V9L6 283 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 ZNF697Q5TEC3 545 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 SV2BQ7L1I2 683 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 FAM228AQ86W67 206 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 RHPN2Q8IUC4 686 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 KSR1Q8IVT5 923 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 FAM200AQ8TCP9 573 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 NLRP7Q8WX94 980 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 APBB2Q92870 758 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 TIFAQ96CG3 184 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 PAGE5Q96GU1 130 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 NLRP4Q96MN2 994 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 C7orf25Q9BPX7 421 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 ZBED2Q9BTP6 218 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 MMTAG2Q9BU76 263 aaKnown RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 GZF1Q9H116 711 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 TTYH1Q9H313 450 aaPredicted RBP8.4□□□□□ -1.06
SDCBP-206ENST00000519115 ADAMTS10Q9H324 1103 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 ERVK-5Q9HDB9 667 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 XPNPEP1Q9NQW7 623 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 ANKEF1Q9NU02 776 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 KCNG1Q9UIX4 513 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 MSRAQ9UJ68 235 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 PADI3Q9ULW8 664 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 CHD9Q3L8U1 2897 aa8.4□□□□□ -1.06
SDCBP-206ENST00000519115 RALGAPA2Q2PPJ7 1873 aa8.4□□□□□ -1.07
SDCBP-206ENST00000519115 CHD7Q9P2D1 2997 aa8.4□□□□□ -1.07
SDCBP-206ENST00000519115 A0A087WZ62 844 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 LCHNA4D1U4 455 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 ARHGEF35A5YM69 484 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 DLL1O00548 723 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 IKBKBO14920 756 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 MAP3K13O43283 966 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 TLL1O43897 1013 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 MGEA5O60502 916 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 ARHGEF15O94989 841 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 AMHP03971 560 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 CA3P07451 260 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 PYGBP11216 843 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 SCP2P22307 547 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 ERCC5P28715 1186 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-206ENST00000519115 TYRO3Q06418 890 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 DPYDQ12882 1025 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 CAMK4Q16566 473 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 NAALADL2Q58DX5 795 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 GPR153Q6NV75 609 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 USP49Q70CQ1 688 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 MAEAQ7L5Y9 396 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 SPRED2Q7Z698 418 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 USP38Q8NB14 1042 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 PRPF31Q8WWY3 499 aaKnown RBP8.39□□□□□ -1.07
SDCBP-206ENST00000519115 PSPC1Q8WXF1 523 aaKnown RBP8.39□□□□□ -1.07
SDCBP-206ENST00000519115 ANP32BQ92688 251 aaKnown RBP8.39□□□□□ -1.07
SDCBP-206ENST00000519115 SMARCE1Q969G3 411 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 CCDC47Q96A33 483 aaKnown RBP8.39□□□□□ -1.07
SDCBP-206ENST00000519115 CDK5RAP3Q96JB5 506 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 NACC1Q96RE7 527 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 PLIN2Q99541 437 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 MTRQ99707 1265 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 JPH2Q9BR39 696 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-206ENST00000519115 FDXACB1Q9BRP7 624 aaPredicted RBP8.39□□□□□ -1.07
SDCBP-206ENST00000519115 TIPINQ9BVW5 301 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 TMX1Q9H3N1 280 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 ATP6V0A4Q9HBG4 840 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 SERTAD1Q9UHV2 236 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 ST3GAL5Q9UNP4 418 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 DNM3Q9UQ16 869 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 PPME1Q9Y570 386 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 PCDHA5Q9Y5H7 936 aa8.39□□□□□ -1.07
SDCBP-206ENST00000519115 PCDHA11Q9Y5I1 949 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms