RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	ZNF623	O75123	536 aa		26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	ARL2	P36404	184 aa		26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	PTEN	P60484	403 aa		26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	GLB1L	Q6UWU2	654 aa		26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	ZNF598	Q86UK7	904 aa	Known RBP	26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	IFNLR1	Q8IU57	520 aa	Predicted RBP	26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	COLGALT1	Q8NBJ5	622 aa		26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	SNX29	Q8TEQ0	813 aa		26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	CASD1	Q96PB1	797 aa		26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	POLR3F	Q9H1D9	316 aa	Predicted RBP	26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	UBE2Z	Q9H832	354 aa	Predicted RBP	26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	ALG13	Q9NP73	1137 aa	Known RBP	26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	PUF60	Q9UHX1	559 aa	Known RBP	26.84	■■□□□ 1.89
CNOT7-204	ENST00000518885	INO80B-WBP1	J3KQ70	363 aa		26.83	■■□□□ 1.89
CNOT7-204	ENST00000518885	ITGB1	P05556	798 aa		26.83	■■□□□ 1.89
CNOT7-204	ENST00000518885	CUL4A	Q13619	759 aa		26.83	■■□□□ 1.89
CNOT7-204	ENST00000518885	TCEAL5	Q5H9L2	206 aa		26.83	■■□□□ 1.89
CNOT7-204	ENST00000518885	BRAP	Q7Z569	592 aa		26.83	■■□□□ 1.89
CNOT7-204	ENST00000518885	ZNF558	Q96NG5	402 aa		26.83	■■□□□ 1.89
CNOT7-204	ENST00000518885	REV3L	O60673	3130 aa		26.83	■■□□□ 1.88
CNOT7-204	ENST00000518885	FSD2	A1L4K1	749 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	BMP15	O95972	392 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	KRT17	Q04695	432 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	CAPS	Q13938	189 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	PDE12	Q6L8Q7	609 aa	Known RBP	26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	NOTUM	Q6P988	496 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	PADI6	Q6TGC4	694 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	ZBTB8OS	Q8IWT0	167 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	KCTD17	Q8N5Z5	321 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	SPPL3	Q8TCT6	385 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	HELQ	Q8TDG4	1101 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	POF1B	Q8WVV4	589 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	UBN1	Q9NPG3	1134 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	DAXX	Q9UER7	740 aa	Predicted RBP	26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	CNTNAP2	Q9UHC6	1331 aa		26.82	■■□□□ 1.88
CNOT7-204	ENST00000518885	XIRP2	A4UGR9	3374 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	TFF2	Q03403	129 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	PPP2R5A	Q15172	486 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	CLLU1OS	Q5K130	101 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	ARL6IP4	Q66PJ3	421 aa	Known RBP	26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	HACE1	Q8IYU2	909 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	URGCP	Q8TCY9	931 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	PABPC5	Q96DU9	382 aa	Known RBP	26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	C2orf40	Q9H1Z8	148 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	CWH43	Q9H720	699 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	MINDY3	Q9H8M7	445 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	KIAA1024	Q9UPX6	916 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	DNM3	Q9UQ16	869 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	LZTS1	Q9Y250	596 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	PCDHB2	Q9Y5E7	798 aa		26.81	■■□□□ 1.88
CNOT7-204	ENST00000518885	FGF18	O76093	207 aa		26.8	■■□□□ 1.88
CNOT7-204	ENST00000518885	CYP11B2	P19099	503 aa		26.8	■■□□□ 1.88
CNOT7-204	ENST00000518885	GLRA2	P23416	452 aa		26.8	■■□□□ 1.88
CNOT7-204	ENST00000518885	ATP2C1	P98194	919 aa	Predicted RBP	26.8	■■□□□ 1.88
CNOT7-204	ENST00000518885	PUS10	Q3MIT2	529 aa	Known RBP	26.8	■■□□□ 1.88
CNOT7-204	ENST00000518885	ASAP3	Q8TDY4	903 aa		26.8	■■□□□ 1.88
CNOT7-204	ENST00000518885	ADAMTS19	Q8TE59	1207 aa		26.8	■■□□□ 1.88
CNOT7-204	ENST00000518885	RNF19A	Q9NV58	838 aa		26.8	■■□□□ 1.88
CNOT7-204	ENST00000518885	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	LRRIQ4	A6NIV6	560 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	ATF7	P17544	494 aa	Predicted RBP	26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	ALDH7A1	P49419	539 aa	Known RBP	26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	PLCB3	Q01970	1234 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	RNASEL	Q05823	741 aa	Known RBP	26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	KCNT2	Q6UVM3	1135 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	MAEA	Q7L5Y9	396 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	MICAL1	Q8TDZ2	1067 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	KIFAP3	Q92845	792 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	INTS4	Q96HW7	963 aa	Known RBP	26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	IFT74	Q96LB3	600 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	PRIMPOL	Q96LW4	560 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	TRIM6	Q9C030	488 aa	Predicted RBP	26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	TLR9	Q9NR96	1032 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	DDX19A	Q9NUU7	478 aa	Known RBP	26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	FAM50B	Q9Y247	325 aa		26.79	■■□□□ 1.88
CNOT7-204	ENST00000518885	SPTBN5	Q9NRC6	3674 aa	Known RBP	26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885		A0A087WWV3	80 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	TSPAN1	O60635	241 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	MBTD1	Q05BQ5	628 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	BMS1	Q14692	1282 aa	Known RBP	26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	NOMO2	Q5JPE7	1267 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	EP400NL	Q6ZTU2	488 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	UHRF1	Q96T88	793 aa	Predicted RBP	26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	NT5C3A	Q9H0P0	336 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	BHMT2	Q9H2M3	363 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	PRMT7	Q9NVM4	692 aa	Predicted RBP	26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	SPG21	Q9NZD8	308 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	KANSL3	Q9P2N6	904 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	KIAA1671	Q9BY89	1806 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	VCAN	P13611	3396 aa		26.78	■■□□□ 1.88
CNOT7-204	ENST00000518885	CUL9	Q8IWT3	2517 aa		26.77	■■□□□ 1.88
CNOT7-204	ENST00000518885	VPS37C	A5D8V6	355 aa	Predicted RBP	26.77	■■□□□ 1.88
CNOT7-204	ENST00000518885	KCNA5	P22460	613 aa		26.77	■■□□□ 1.88
CNOT7-204	ENST00000518885	HOXA11	P31270	313 aa	Predicted RBP	26.77	■■□□□ 1.88
CNOT7-204	ENST00000518885	LEXM	Q3ZCV2	418 aa		26.77	■■□□□ 1.88
CNOT7-204	ENST00000518885	MRPL10	Q7Z7H8	261 aa	Known RBP	26.77	■■□□□ 1.88
CNOT7-204	ENST00000518885	CDK5RAP3	Q96JB5	506 aa		26.77	■■□□□ 1.88
CNOT7-204	ENST00000518885	GTF3C3	Q9Y5Q9	886 aa		26.77	■■□□□ 1.88
CNOT7-204	ENST00000518885	BMP1	P13497	986 aa		26.76	■■□□□ 1.87

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms