RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	RPGR	Q92834	1020 aa	Known RBP	4.25	□□□□□ -1.73
PCM1-208	ENST00000518877	MAML3	Q96JK9	1138 aa		4.25	□□□□□ -1.73
PCM1-208	ENST00000518877	C16orf92	Q96LL3	132 aa		4.25	□□□□□ -1.73
PCM1-208	ENST00000518877	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.25	□□□□□ -1.73
PCM1-208	ENST00000518877	BOC	Q9BWV1	1114 aa		4.25	□□□□□ -1.73
PCM1-208	ENST00000518877	SYNPO2L	Q9H987	977 aa		4.25	□□□□□ -1.73
PCM1-208	ENST00000518877	RSAD1	Q9HA92	442 aa		4.25	□□□□□ -1.73
PCM1-208	ENST00000518877	SPATA31A6	Q5VVP1	1343 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	ATP2B1	P20020	1258 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	KIR2DL3	P43628	341 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	KIF11	P52732	1056 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	KRTAP10-11	P60412	298 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	TAP1	Q03518	808 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	RBL2	Q08999	1139 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	TMEM177	Q53S58	311 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	EPHA10	Q5JZY3	1008 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	COLEC12	Q5KU26	742 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	TTC38	Q5R3I4	469 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877		Q6YL49	198 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	OTOP1	Q7RTM1	612 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	IGSF22	Q8N9C0	903 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	TUBGCP5	Q96RT8	1024 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	ZNF768	Q9H5H4	540 aa	Known RBP	4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	ANKFY1	Q9P2R3	1169 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	SYNPO2	Q9UMS6	1093 aa		4.24	□□□□□ -1.73
PCM1-208	ENST00000518877	CENPVL1	A0A0U1RR11	272 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	LPXN	O60711	386 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	NPTXR	O95502	500 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	ZEB1	P37275	1124 aa	Predicted RBP	4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	AVPR1B	P47901	424 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	CLK3	P49761	638 aa	Known RBP	4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	FAM214A	Q32MH5	1076 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	BMP8A	Q7Z5Y6	402 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	FGD2	Q7Z6J4	655 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	CAVIN3	Q969G5	261 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	DEPDC7	Q96QD5	511 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	UIMC1	Q96RL1	719 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	DNAJC7	Q99615	494 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	TANGO6	Q9C0B7	1094 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	COX11	Q9Y6N1	276 aa		4.23	□□□□□ -1.73
PCM1-208	ENST00000518877	ZFP36	P26651	326 aa	Known RBP	4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	MECP2	P51608	486 aa	Known RBP	4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	BCAR1	P56945	870 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	ERCC6L	Q2NKX8	1250 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	FBXO42	Q6P3S6	717 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	BRAP	Q7Z569	592 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	CMTR2	Q8IYT2	770 aa	Known RBP	4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	MYEOV	Q96EZ4	313 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	SLC46A2	Q9BY10	475 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	MRPL4	Q9BYD3	311 aa	Known RBP	4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	WDR11	Q9BZH6	1224 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	KCNH6	Q9H252	994 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	SERHL2	Q9H4I8	314 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	PCIF1	Q9H4Z3	704 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	TRIM39	Q9HCM9	518 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	SNTG2	Q9NY99	539 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	TRPM5	Q9NZQ8	1165 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	HDAC5	Q9UQL6	1122 aa		4.22	□□□□□ -1.73
PCM1-208	ENST00000518877	CCDC163	A0A0D9SF12	145 aa		4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	DVL2	O14641	736 aa		4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	GTF2F1	P35269	517 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	SP5	Q6BEB4	398 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	BHLHA9	Q7RTU4	235 aa		4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	FAM83A	Q86UY5	434 aa		4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	R3HDML	Q9H3Y0	253 aa		4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	INSL6	Q9Y581	213 aa		4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	COL11A2	P13942	1736 aa	Predicted RBP	4.21	□□□□□ -1.74
PCM1-208	ENST00000518877	AHRR	A9YTQ3	701 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	INO80B-WBP1	J3KQ70	363 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	NRP1	O14786	923 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	MAFG	O15525	162 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	MTSS1	O43312	755 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	HOXA3	O43365	443 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	APOL3	O95236	402 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	APOBEC3A	P31941	199 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	FAM189B	P81408	668 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	ARHGAP44	Q17R89	818 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	IQSEC1	Q6DN90	963 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	CCDC62	Q6P9F0	684 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	OR5M3	Q8NGP4	307 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	NELL1	Q92832	810 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	INO80B	Q9C086	356 aa	Predicted RBP	4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	ACSS2	Q9NR19	701 aa		4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	TNPO3	Q9Y5L0	923 aa	Known RBP	4.2	□□□□□ -1.74
PCM1-208	ENST00000518877	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.19	□□□□□ -1.74
PCM1-208	ENST00000518877		E9PSI1	815 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	RNASET2	O00584	256 aa	Known RBP	4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	DNAJC6	O75061	913 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	NCR1	O76036	304 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	FSBP	O95073	299 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	CXCR5	P32302	372 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	PTTG1IP	P53801	180 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	ZNF174	Q15697	407 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	VPS72	Q15906	364 aa		4.19	□□□□□ -1.74
PCM1-208	ENST00000518877	MAN2A1	Q16706	1144 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms