RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.96□□□□□ -1.46
SQLE-202ENST00000518604 ZBTB21Q9ULJ3 1066 aa5.96□□□□□ -1.46
SQLE-202ENST00000518604 ANKRD6Q9Y2G4 727 aa5.96□□□□□ -1.46
SQLE-202ENST00000518604 GIT1Q9Y2X7 761 aa5.96□□□□□ -1.46
SQLE-202ENST00000518604 LUC7L2Q9Y383 392 aaKnown RBP5.96□□□□□ -1.46
SQLE-202ENST00000518604 RFPL1O75677 317 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 CELA3BP08861 270 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 KCNC1P48547 511 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 STAT5BP51692 787 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 PCOLCEQ15113 449 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 MUM1L1Q5H9M0 696 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 BTNL9Q6UXG8 535 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 SP8Q8IXZ3 490 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 LRRC56Q8IYG6 542 aaPredicted RBP5.95□□□□□ -1.46
SQLE-202ENST00000518604 TEKT5Q96M29 485 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 NUP88Q99567 741 aaPredicted RBP5.95□□□□□ -1.46
SQLE-202ENST00000518604 ACE2Q9BYF1 805 aaPredicted RBP5.95□□□□□ -1.46
SQLE-202ENST00000518604 OR10A2Q9H208 303 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 DNAI1Q9UI46 699 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 ZDHHC9Q9Y397 364 aa5.95□□□□□ -1.46
SQLE-202ENST00000518604 A0A1W2PR48 441 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 NOBOXO60393 691 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 U2AF1L5P0DN76 240 aaPredicted RBP5.94□□□□□ -1.46
SQLE-202ENST00000518604 OSMP13725 252 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 ZSCAN20P17040 1043 aaPredicted RBP5.94□□□□□ -1.46
SQLE-202ENST00000518604 CFPP27918 469 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 MRE11P49959 708 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 GJA9P57773 515 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 CDK17Q00537 523 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 U2AF1Q01081 240 aaKnown RBP eCLIP5.94□□□□□ -1.46
SQLE-202ENST00000518604 MALLQ13021 153 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 PPP2R5AQ15172 486 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 ADRM1Q16186 407 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 VMACQ2NL98 169 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 AGBL4Q5VU57 503 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 BORAQ6PGQ7 559 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 LARP4Q71RC2 724 aaKnown RBP eCLIP5.94□□□□□ -1.46
SQLE-202ENST00000518604 RALYLQ86SE5 291 aaKnown RBP5.94□□□□□ -1.46
SQLE-202ENST00000518604 CLEC14AQ86T13 490 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 SIAH1Q8IUQ4 282 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 CMTR2Q8IYT2 770 aaKnown RBP5.94□□□□□ -1.46
SQLE-202ENST00000518604 FDXACB1Q9BRP7 624 aaPredicted RBP5.94□□□□□ -1.46
SQLE-202ENST00000518604 GREM2Q9H772 168 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 MSL2Q9HCI7 577 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 JADE2Q9NQC1 790 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 ZIM2Q9NZV7 527 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 MAGEL2Q9UJ55 1249 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 ZNF180Q9UJW8 692 aa5.94□□□□□ -1.46
SQLE-202ENST00000518604 PNMA8BQ9ULN7 279 aaPredicted RBP5.94□□□□□ -1.46
SQLE-202ENST00000518604 CTDP1Q9Y5B0 961 aaPredicted RBP5.94□□□□□ -1.46
SQLE-202ENST00000518604 NDUFS2O75306 463 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 LY86O95711 162 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 CT47B1P0C2W7 299 aaPredicted RBP5.93□□□□□ -1.46
SQLE-202ENST00000518604 GAAP10253 952 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 WASP42768 502 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 ADKP55263 362 aaKnown RBP5.93□□□□□ -1.46
SQLE-202ENST00000518604 CD69Q07108 199 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 MGAT5Q09328 741 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 FZD5Q13467 585 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 NFYCQ13952 458 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 ODF1Q14990 250 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 KRTAP19-4Q3LI73 84 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 ZNF568Q3ZCX4 644 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 C19orf54Q5BKX5 351 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 USP30Q70CQ3 517 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 TAS1R1Q7RTX1 841 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 PLEKHH3Q7Z736 793 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 CHPFQ8IZ52 775 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 HSPBAP1Q96EW2 488 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 UIMC1Q96RL1 719 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 IP6K2Q9UHH9 426 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 SCOCQ9UIL1 159 aa5.93□□□□□ -1.46
SQLE-202ENST00000518604 PMS2P1A4D2B8 440 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 TSPAN6O43657 245 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 PHF2O75151 1096 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 PARNO95453 639 aaKnown RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 LTA4HP09960 611 aaKnown RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 ZNF888P0CJ79 500 aaPredicted RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 C5AR1P21730 350 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 AKAP5P24588 427 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 SLC16A1P53985 500 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 SURF1Q15526 300 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 C1QL4Q86Z23 238 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 KBTBD2Q8IY47 623 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 RAVER1Q8IY67 606 aaKnown RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 LGI4Q8N135 537 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 PLA2G15Q8NCC3 412 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 GLB1L3Q8NCI6 653 aaPredicted RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 JPH3Q8WXH2 748 aaPredicted RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 GCDHQ92947 438 aaPredicted RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 SLC7A6OSQ96CW6 309 aaPredicted RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 RTFDC1Q9BY42 306 aaPredicted RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 RHOBTB2Q9BYZ6 727 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 CSRNP2Q9H175 543 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 C14orf93Q9H972 538 aaKnown RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 CHPF2Q9P2E5 772 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 SAP30BPQ9UHR5 308 aaKnown RBP5.92□□□□□ -1.46
SQLE-202ENST00000518604 SLC4A7Q9Y6M7 1214 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 RPTORQ8N122 1335 aa5.92□□□□□ -1.46
SQLE-202ENST00000518604 ARHGAP6O43182 974 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms