RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 LDLRAD1Q5T700 205 aa28.91■■■□□ 2.22
COL13A1-210ENST00000517713 ZSWIM2Q8NEG5 633 aa28.91■■■□□ 2.22
COL13A1-210ENST00000517713 IFT74Q96LB3 600 aa28.91■■■□□ 2.22
COL13A1-210ENST00000517713 IGKV6D-21A0A0A0MT36 114 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 IQCA1LA6NCM1 817 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 FARP2O94887 1054 aaPredicted RBP28.9■■■□□ 2.22
COL13A1-210ENST00000517713 TGFB3P10600 412 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 CNGA1P29973 690 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 STAT1P42224 750 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 NEDD9Q14511 834 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 EMSYQ7Z589 1322 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 ANKRD13CQ8N6S4 541 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 MPHOSPH6Q99547 160 aaKnown RBP28.9■■■□□ 2.22
COL13A1-210ENST00000517713 STK33Q9BYT3 514 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 POLR3FQ9H1D9 316 aaPredicted RBP28.9■■■□□ 2.22
COL13A1-210ENST00000517713 DNAJC12Q9UKB3 198 aa28.9■■■□□ 2.22
COL13A1-210ENST00000517713 ZC3H4Q9UPT8 1303 aaKnown RBP28.9■■■□□ 2.22
COL13A1-210ENST00000517713 N4BP1O75113 896 aaKnown RBP28.89■■■□□ 2.22
COL13A1-210ENST00000517713 ADSSP30520 456 aa28.89■■■□□ 2.22
COL13A1-210ENST00000517713 RNF10Q8N5U6 811 aaKnown RBP28.89■■■□□ 2.22
COL13A1-210ENST00000517713 ALS2CR12Q96Q35 445 aa28.89■■■□□ 2.22
COL13A1-210ENST00000517713 JRKLQ9Y4A0 524 aa28.89■■■□□ 2.22
COL13A1-210ENST00000517713 DAAM1Q9Y4D1 1078 aa28.89■■■□□ 2.22
COL13A1-210ENST00000517713 SCN4AP35499 1836 aa28.89■■■□□ 2.22
COL13A1-210ENST00000517713 GSTTP1A0A1W2PQM5 241 aa28.89■■■□□ 2.21
COL13A1-210ENST00000517713 PGK2P07205 417 aa28.89■■■□□ 2.21
COL13A1-210ENST00000517713 FERP16591 822 aa28.89■■■□□ 2.21
COL13A1-210ENST00000517713 GJA5P36382 358 aa28.89■■■□□ 2.21
COL13A1-210ENST00000517713 POLGP54098 1239 aaPredicted RBP28.89■■■□□ 2.21
COL13A1-210ENST00000517713 APEX2Q9UBZ4 518 aa28.89■■■□□ 2.21
COL13A1-210ENST00000517713 SALL4Q9UJQ4 1053 aa28.89■■■□□ 2.21
COL13A1-210ENST00000517713 ADGRA3Q8IWK6 1321 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 LRRC37A2A6NM11 1700 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 CTAGE15A4D2H0 777 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 P4HA2O15460 535 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 CTAGE8P0CG41 777 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 ANXA13P27216 316 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 TUBB4BP68371 445 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 CETN1Q12798 172 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 EMC2Q15006 297 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 GPR162Q16538 588 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 C10orf76Q5T2E6 689 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 CTAGE6Q86UF2 777 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 CTAGE4Q8IX94 777 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 EPC1Q9H2F5 836 aa28.88■■■□□ 2.21
COL13A1-210ENST00000517713 GOLGA8IPA6NC78 632 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 GOLGA8JA6NMD2 632 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 PPP3CAQ08209 521 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 SNAPC2Q13487 334 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 C1orf220Q5T0J3 134 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 EEPD1Q7L9B9 569 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 LMO3Q8TAP4 145 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 MMP19Q99542 508 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 F8VZ95 297 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 H0YCG3 227 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 SOX5P35711 763 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 KCTD2Q14681 263 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 DRAP1Q14919 205 aaPredicted RBP28.87■■■□□ 2.21
COL13A1-210ENST00000517713 PNMA8AQ86V59 439 aaPredicted RBP28.87■■■□□ 2.21
COL13A1-210ENST00000517713 PLEKHO2Q8TD55 490 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 SLC10A4Q96EP9 437 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 NOX5Q96PH1 765 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 NIFKQ9BYG3 293 aaKnown RBP28.87■■■□□ 2.21
COL13A1-210ENST00000517713 KCNG1Q9UIX4 513 aa28.87■■■□□ 2.21
COL13A1-210ENST00000517713 SRGAP2O75044 1071 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 GFPT2O94808 682 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 MCCD1P59942 119 aaPredicted RBP28.86■■■□□ 2.21
COL13A1-210ENST00000517713 SNRNP35Q16560 246 aaKnown RBP28.86■■■□□ 2.21
COL13A1-210ENST00000517713 FGD4Q96M96 766 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 PCYT2Q99447 389 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 ARGLU1Q9NWB6 273 aaPredicted RBP28.86■■■□□ 2.21
COL13A1-210ENST00000517713 SOCS7O14512 581 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 GGPS1O95749 300 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 ADRB2P07550 413 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 PNMA6AP0CW24 399 aaPredicted RBP28.86■■■□□ 2.21
COL13A1-210ENST00000517713 ABCD1P33897 745 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 GCLMP48507 274 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 NAB2Q15742 525 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 LY6KQ17RY6 165 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 KIAA0753Q2KHM9 967 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 SLC39A4Q6P5W5 647 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 VPS36Q86VN1 386 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 CBWD2Q8IUF1 395 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 SAAL1Q96ER3 474 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 CCDC94Q9BW85 323 aaPredicted RBP28.86■■■□□ 2.21
COL13A1-210ENST00000517713 MROH8Q9H579 483 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 DHX33Q9H6R0 707 aaKnown RBP28.86■■■□□ 2.21
COL13A1-210ENST00000517713 ARHGAP28Q9P2N2 729 aa28.86■■■□□ 2.21
COL13A1-210ENST00000517713 DNAJC25-GNG10A0A024R161 153 aa28.85■■■□□ 2.21
COL13A1-210ENST00000517713 ZSCAN20P17040 1043 aaPredicted RBP28.85■■■□□ 2.21
COL13A1-210ENST00000517713 RFX1P22670 979 aa28.85■■■□□ 2.21
COL13A1-210ENST00000517713 FAM160B1Q5W0V3 765 aa28.85■■■□□ 2.21
COL13A1-210ENST00000517713 PHLDB3Q6NSJ2 640 aa28.85■■■□□ 2.21
COL13A1-210ENST00000517713 METTL7BQ6UX53 244 aa28.85■■■□□ 2.21
COL13A1-210ENST00000517713 ARID3AQ99856 593 aa28.85■■■□□ 2.21
COL13A1-210ENST00000517713 BUB1O43683 1085 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 EVI5O60447 810 aa28.84■■■□□ 2.21
COL13A1-210ENST00000517713 NAP1L1P55209 391 aaKnown RBP28.84■■■□□ 2.21
COL13A1-210ENST00000517713 BRDTQ58F21 947 aaPredicted RBP28.84■■■□□ 2.21
COL13A1-210ENST00000517713 FMNL3Q8IVF7 1028 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms