RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 TRIP13Q15645 432 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-203ENST00000517490 ERMARDQ5T6L9 678 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 SLFN13Q68D06 897 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 MAEAQ7L5Y9 396 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 ADGRA1Q86SQ6 560 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 RPUSD2Q8IZ73 545 aaKnown RBP7.14□□□□□ -1.27
CPNE3-203ENST00000517490 KIF2BQ8N4N8 673 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 CFAP61Q8NHU2 1237 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 CCDC110Q8TBZ0 833 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 FAM81BQ96LP2 452 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 FAM20AQ96MK3 541 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 SYNCQ9H7C4 482 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 KDM3BQ7LBC6 1761 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 POTEFA5A3E0 1075 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 H0Y3Z8 333 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 EPHB6O15197 1021 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 CDH16O75309 829 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 ZWINTO95229 277 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 PDHA1P08559 390 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 POTEIP0CG38 1075 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 RARGP13631 454 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 DRD4P21917 467 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 PAX7P23759 505 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 SLC16A2P36021 539 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 KLC1Q07866 573 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 XRCC4Q13426 336 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 GNPTABQ3T906 1256 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 POTEGQ6S5H5 508 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 POTEEQ6S8J3 1075 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 C4orf32Q8N8J7 132 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 ZNF564Q8TBZ8 553 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-203ENST00000517490 STAMBPL1Q96FJ0 436 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 ACCSQ96QU6 501 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 SENP1Q9P0U3 644 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 CRYBG1Q9Y4K1 1723 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 hCG_2014768A0A024R1R8 64 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 UBOX5O94941 541 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 PON1P27169 355 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 MXI1P50539 228 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 BFSP1Q12934 665 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 LONRF1Q17RB8 773 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 DCUN1D2Q6PH85 259 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 KCNV1Q6PIU1 500 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 KCTD1Q719H9 257 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 C1orf112Q9NSG2 853 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 DNAJC17Q9NVM6 304 aaKnown RBP7.14□□□□□ -1.27
CPNE3-203ENST00000517490 SEL1LQ9UBV2 794 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 ZBTB21Q9ULJ3 1066 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 UBR1Q8IWV7 1749 aa7.14□□□□□ -1.27
CPNE3-203ENST00000517490 NPHP3-ACAD11A0A0J9YXS1 232 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ENO4A6NNW6 628 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 GNPATO15228 680 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 C21orf2O43822 256 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 CFBP00751 764 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 IFNB1P01574 187 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 CDR2Q01850 454 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 KRT17Q04695 432 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 PPP1R2P3Q6NXS1 205 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 CAPN12Q6ZSI9 719 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 FBXO33Q7Z6M2 555 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 TRIM42Q8IWZ5 723 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ARHGAP18Q8N392 663 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 OGFOD1Q8N543 542 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 SLC17A8Q8NDX2 589 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ATXN2LQ8WWM7 1075 aaKnown RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 GLG1Q92896 1179 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 LMO7Q8WWI1 1683 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 OPHN1O60890 802 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 RTN2O75298 545 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 RASSF9O75901 435 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 BAG2O95816 211 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ESRRAP11474 423 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ITGA4P13612 1032 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 LRRC23Q53EV4 343 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 SCFD2Q8WU76 684 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 NUP85Q9BW27 656 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 TEKT3Q9BXF9 490 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 TRIM55Q9BYV6 548 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 WDR11Q9BZH6 1224 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 APEX2Q9UBZ4 518 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ALG6Q9Y672 507 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 GYG2O15488 501 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 PPFIA2O75334 1257 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 PLS3P13797 630 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 FNTAP49354 379 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 MAP3K21Q5TCX8 1036 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 NAIF1Q69YI7 327 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 LRRC55Q6ZSA7 311 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 MIER3Q7Z3K6 550 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 SYT2Q8N9I0 419 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 FBXO25Q8TCJ0 367 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 CELF1Q92879 486 aaKnown RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 TRAIPQ9BWF2 469 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 SERPINB13Q9UIV8 391 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 SMG5Q9UPR3 1016 aaKnown RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 HAUS5O94927 633 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 ATF7P17544 494 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-203ENST00000517490 RASA1P20936 1047 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 FMO5P49326 533 aa7.13□□□□□ -1.27
CPNE3-203ENST00000517490 SF3B3Q15393 1217 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms