RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 TBX1O43435 398 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 FDXRP22570 491 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 ECI1P42126 302 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 NPEPPSP55786 919 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 BLOC1S1P78537 153 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 LAMB3Q13751 1172 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 SF1Q15637 639 aaKnown RBP0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 KRTAP24-1Q3LI83 254 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 E4F1Q66K89 784 aaPredicted RBP0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 GRAMD4Q6IC98 578 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 ZNF66Q6ZN08 573 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 CXXC5Q7LFL8 322 aaKnown RBP0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 OTOP3Q7RTS5 596 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 NR2C2APQ86WQ0 139 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 SYT12Q8IV01 421 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 NRACQ8N912 160 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 UHMK1Q8TAS1 419 aaKnown RBP0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 GCDHQ92947 438 aaPredicted RBP0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 SARAFQ96BY9 339 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 CAMKK2Q96RR4 588 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 KCNJ15Q99712 375 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 CPPED1Q9BRF8 314 aaPredicted RBP0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 RSRP1Q9BUV0 290 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 SMURF1Q9HCE7 757 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 KBTBD4Q9NVX7 518 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 EMC9Q9Y3B6 208 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 AFG3L2Q9Y4W6 797 aa0.86□□□□□ -2.27
RNU6-557P-201ENST00000516842 ROBO2Q9HCK4 1378 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 GAGE12BA1L429 117 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 GAGE12HA6NDE8 117 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 FAM90A27PA6NNH2 459 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 C4orf47A7E2U8 309 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 ADAM10O14672 748 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 MSCO60682 206 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 TOX4O94842 621 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 MPIG6BO95866 241 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 ZSCAN20P17040 1043 aaPredicted RBP0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 GPD1P21695 349 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 PTGS1P23219 599 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 ST13P50502 369 aaKnown RBP0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 RBM10P98175 930 aaKnown RBP0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 KCNAB2Q13303 367 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 UBE3CQ15386 1083 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 C9orf50Q5SZB4 431 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 OTUD3Q5T2D3 398 aaPredicted RBP0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 TSTD2Q5T7W7 516 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 FCRLBQ6BAA4 426 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 SLC18B1Q6NT16 456 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 KCTD1Q719H9 257 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 ZNF296Q8WUU4 475 aaPredicted RBP0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 SLC7A6OSQ96CW6 309 aaPredicted RBP0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 LYZL4Q96KX0 146 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 FRMD6Q96NE9 622 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 SLITRK1Q96PX8 696 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 CYP26B1Q9NR63 512 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 UCKL1Q9NWZ5 548 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 ADAM21Q9UKJ8 722 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 DSEQ9UL01 958 aa0.85□□□□□ -2.27
RNU6-557P-201ENST00000516842 USP31Q70CQ4 1352 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 CAMTA2O94983 1202 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 CD1AP06126 327 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 CKBP12277 381 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 LTBRP36941 435 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 EIF4A3P38919 411 aaKnown RBP0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 ECE1P42892 770 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 MMP13P45452 471 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 ZNF165P49910 485 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 EPHA5P54756 1037 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 NHLH2Q02577 135 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 APOBRQ0VD83 1088 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 KRTAP21-2Q3LI59 83 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 CEP78Q5JTW2 689 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 BTBD8Q5XKL5 378 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 LARP1BQ659C4 914 aaKnown RBP0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 KRT40Q6A162 431 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 APBB1IPQ7Z5R6 666 aaPredicted RBP0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 CUZD1Q86UP6 607 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 TXNDC2Q86VQ3 553 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 KRT73Q86Y46 540 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 PLXDC1Q8IUK5 500 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 PPIL6Q8IXY8 311 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 OR52N2Q8NGI0 321 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 BTN2A2Q8WVV5 523 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 DUSP9Q99956 384 aaKnown RBP0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 BTBD2Q9BX70 525 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 OR10A5Q9H207 317 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 NKX2-4Q9H2Z4 354 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 NCOA5Q9HCD5 579 aaKnown RBP0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 BTBD7Q9P203 1132 aa0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 SUPT16HQ9Y5B9 1047 aaKnown RBP0.84□□□□□ -2.27
RNU6-557P-201ENST00000516842 TP53BP1Q12888 1972 aaPredicted RBP0.83□□□□□ -2.28
RNU6-557P-201ENST00000516842 SOWAHDA6NJG2 315 aa0.83□□□□□ -2.28
RNU6-557P-201ENST00000516842 LINC01548A6NM66 108 aa0.83□□□□□ -2.28
RNU6-557P-201ENST00000516842 MARCH11A6NNE9 402 aa0.83□□□□□ -2.28
RNU6-557P-201ENST00000516842 KCNU1A8MYU2 1149 aa0.83□□□□□ -2.28
RNU6-557P-201ENST00000516842 LATS1O95835 1130 aa0.83□□□□□ -2.28
RNU6-557P-201ENST00000516842 ELFN1P0C7U0 828 aa0.83□□□□□ -2.28
RNU6-557P-201ENST00000516842 GUCY2CP25092 1073 aa0.83□□□□□ -2.28
RNU6-557P-201ENST00000516842 ANTXR2P58335 489 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms