RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 PLA2G12AQ9BZM1 189 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 CCDC8Q9H0W5 538 aaPredicted RBP3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 PANK3Q9H999 370 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 GINM1Q9NU53 330 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 KNSTRNQ9Y448 316 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 KNTC1P50748 2209 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 PCDH15Q96QU1 1955 aa3.93□□□□□ -1.78
SCARNA13-201ENST00000516672 MGAM2Q2M2H8 2515 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 LOXHD1Q8IVV2 1947 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 NRG2O14511 850 aaPredicted RBP3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 FLOT1O75955 427 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 WNT1P04628 370 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 FOSL1P15407 271 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 CCNE1P24864 410 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 PCSK6P29122 969 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 KRT17Q04695 432 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 SRSF6Q13247 344 aaKnown RBP3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 CCINQ13939 588 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 CLCA4Q14CN2 919 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 PKN3Q6P5Z2 889 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 ATG9AQ7Z3C6 839 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 C11orf74Q86VG3 221 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 VPS37DQ86XT2 251 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 NPAS4Q8IUM7 802 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 DHX37Q8IY37 1157 aaKnown RBP3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 ULK2Q8IYT8 1036 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 C7orf31Q8N865 590 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 GALNT11Q8NCW6 608 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 SMG7Q92540 1137 aaKnown RBP3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 CENPTQ96BT3 561 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 HVCN1Q96D96 273 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 GAD1Q99259 594 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 CDC6Q99741 560 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 ANP32EQ9BTT0 268 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 CAPN10Q9HC96 672 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 TYW1Q9NV66 732 aaKnown RBP3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 CWC25Q9NXE8 425 aaPredicted RBP3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 ERRFI1Q9UJM3 462 aaPredicted RBP3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 SSX2IPQ9Y2D8 614 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 PIAS3Q9Y6X2 628 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 KIAA1109Q2LD37 5005 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 NRCAMQ92823 1304 aa3.92□□□□□ -1.78
SCARNA13-201ENST00000516672 PRKDCP78527 4128 aaKnown RBP3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 CACNA1FO60840 1977 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 A6NJR5 290 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 TNFRSF10BO14763 440 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 INPPL1O15357 1258 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 ZNF862O60290 1169 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 GH2P01242 217 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 SERPINF2P08697 491 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 LAG3P18627 525 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 COPB2P35606 906 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 FOSBP53539 338 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 KRTAP10-9P60411 292 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 FOXD4Q12950 439 aaPredicted RBP3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 TBR1Q16650 682 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 DUOXA1Q1HG43 343 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 DGKKQ5KSL6 1271 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 CYP26C1Q6V0L0 522 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 USP53Q70EK8 1073 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 PPFIBP1Q86W92 1011 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 ZNF280BQ86YH2 543 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 CAMKK1Q8N5S9 505 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 TTC13Q8NBP0 860 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 RHBDD1Q8TEB9 315 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 ZNF384Q8TF68 577 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 EMID1Q96A84 441 aaPredicted RBP3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 HDAC11Q96DB2 347 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 HHIPQ96QV1 700 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 STK31Q9BXU1 1019 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 RHOBTB2Q9BYZ6 727 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 BCL11AQ9H165 835 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 CWH43Q9H720 699 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 DNAJC18Q9H819 358 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 PIDD1Q9HB75 910 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 POLR3BQ9NW08 1133 aaPredicted RBP3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 PILRBQ9UKJ0 227 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 CDH7Q9ULB5 785 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 MRVI1Q9Y6F6 885 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 RAD50Q92878 1312 aa3.91□□□□□ -1.78
SCARNA13-201ENST00000516672 TTC3P53804 2025 aa3.9□□□□□ -1.78
SCARNA13-201ENST00000516672 COL4A2P08572 1712 aa3.9□□□□□ -1.78
SCARNA13-201ENST00000516672 C3orf80F5H4A9 247 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 NPM3O75607 178 aaKnown RBP3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 RFPL2O75678 378 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 SYPP08247 313 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 STAG3L1P0CL83 205 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 MYBP10242 640 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 FSHRP23945 695 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 PRDX5P30044 214 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 PBX3P40426 434 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 PTGER3P43115 390 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 CLCN4P51793 760 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 CRYBB1P53674 252 aaPredicted RBP3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 DEFA6Q01524 100 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 CNTN2Q02246 1040 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 BMS1Q14692 1282 aaKnown RBP3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 RAB3GAP1Q15042 981 aa3.9□□□□□ -1.79
SCARNA13-201ENST00000516672 PTPRNQ16849 979 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms