RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 NRP1O14786 923 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 F2P00734 622 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 ATP2A2P16615 1042 aaKnown RBP4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 PTGS2P35354 604 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 RABGGTBP53611 331 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 SLC25A3Q00325 362 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 SPIDRQ14159 915 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 LDLRAD3Q86YD5 345 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 ELOA2Q8IYF1 753 aaPredicted RBP4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 EFHBQ8N7U6 833 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 ATXN2LQ8WWM7 1075 aaKnown RBP4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 RTF1Q92541 710 aaKnown RBP4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 MNTQ99583 582 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 NOL10Q9BSC4 688 aaKnown RBP4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 KANSL2Q9H9L4 492 aa4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 USP36Q9P275 1121 aaKnown RBP4.34□□□□□ -1.71
RNU4-49P-201ENST00000516080 KLRG2A4D1S0 409 aaPredicted RBP4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 TMEM191CA6NGB0 347 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 RAMP2O60895 175 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 GNAT2P19087 354 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 POU3F2P20265 443 aaPredicted RBP4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 NEK4P51957 841 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 CCDC144BQ3MJ40 725 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 RABL3Q5HYI8 236 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 NAIF1Q69YI7 327 aaPredicted RBP4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 UNQ6494/PRO21346Q6UXR6 183 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 ESPNLQ6ZVH7 1005 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 ZNF627Q7L945 461 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 APBB1IPQ7Z5R6 666 aaPredicted RBP4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 HOMER1Q86YM7 354 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 SLC25A43Q8WUT9 341 aaPredicted RBP4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 ST8SIA2Q92186 375 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 UBXN4Q92575 508 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 HAS1Q92839 578 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 DRC1Q96MC2 740 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 NRDE2Q9H7Z3 1164 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 ZMAT4Q9H898 229 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 GPRC5BQ9NZH0 403 aa4.33□□□□□ -1.72
RNU4-49P-201ENST00000516080 MYPNQ86TC9 1320 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 A0A0A6YYK5 440 aaPredicted RBP4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 ST20-MTHFSA0A0A6YYL1 179 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 KPNA6O60684 536 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 PPFIA4O75335 1185 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 GAAP10253 952 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 DSG1Q02413 1049 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 DCAF17Q5H9S7 520 aaPredicted RBP4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 C16orf86Q6ZW13 317 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 UNC5BQ8IZJ1 945 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 MB21D1Q8N884 522 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 CDYL2Q8N8U2 506 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 PPP1R14CQ8TAE6 165 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 LENG9Q96B70 501 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 SOX7Q9BT81 388 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 H2AFY2Q9P0M6 372 aaPredicted RBP4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 TRPS1Q9UHF7 1281 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 PCDHB6Q9Y5E3 794 aa4.32□□□□□ -1.72
RNU4-49P-201ENST00000516080 HOXA3O43365 443 aaPredicted RBP4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 FAM20BO75063 409 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 RECQL4O94761 1208 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 ALDH1A2O94788 518 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 PCDH8O95206 1070 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 XPAP23025 273 aaPredicted RBP4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 GPR15P49685 360 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 KPNA1P52294 538 aaPredicted RBP4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 OCRLQ01968 901 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 CCDC178Q5BJE1 867 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 METTL24Q5JXM2 366 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 GPR158Q5T848 1215 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 C1QL3Q5VWW1 255 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 KRTAP5-3Q6L8H2 238 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 LRRTM3Q86VH5 581 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 SYNE4Q8N205 404 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 ZNF276Q8N554 614 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 CHTF18Q8WVB6 975 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 FERMT2Q96AC1 680 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 PGBD4Q96DM1 585 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 RNPC3Q96LT9 517 aaKnown RBP4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 PDCD2LQ9BRP1 358 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 MTFR1LQ9H019 292 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 THG1LQ9NWX6 298 aaKnown RBP4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 CD2APQ9Y5K6 639 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 DMRT1Q9Y5R6 373 aa4.31□□□□□ -1.72
RNU4-49P-201ENST00000516080 ZNF891A8MT65 544 aaPredicted RBP4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 ELL2O00472 640 aaPredicted RBP4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 FOXN1O15353 648 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 NRP2O60462 931 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 PPFIA2O75334 1257 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 RPS6KA4O75676 772 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 WNT3AP56704 352 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 PHC1P78364 1004 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 SART3Q15020 963 aaKnown RBP4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 LAIR1Q6GTX8 287 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 MRGPREQ86SM8 312 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 AHI1Q8N157 1196 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 NXPE1Q8N323 547 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 PPM1KQ8N3J5 372 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 GLB1L3Q8NCI6 653 aaPredicted RBP4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 APPBP2Q92624 585 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 NINJ1Q92982 152 aa4.3□□□□□ -1.72
RNU4-49P-201ENST00000516080 ZNF496Q96IT1 587 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms