RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 MTMR9Q96QG7 549 aa15.23■□□□□ 0.03
TCOF1-215ENST00000515516 POP1Q99575 1024 aaKnown RBP15.23■□□□□ 0.03
TCOF1-215ENST00000515516 HSD17B14Q9BPX1 270 aa15.23■□□□□ 0.03
TCOF1-215ENST00000515516 TCF25Q9BQ70 676 aa15.23■□□□□ 0.03
TCOF1-215ENST00000515516 FOXP1Q9H334 677 aaPredicted RBP15.23■□□□□ 0.03
TCOF1-215ENST00000515516 IFT122Q9HBG6 1241 aa15.23■□□□□ 0.03
TCOF1-215ENST00000515516 NGRNQ9NPE2 291 aaKnown RBP15.23■□□□□ 0.03
TCOF1-215ENST00000515516 AGPAT5Q9NUQ2 364 aa15.23■□□□□ 0.03
TCOF1-215ENST00000515516 MYH9P35579 1960 aaKnown RBP15.23■□□□□ 0.03
TCOF1-215ENST00000515516 XIRP2A4UGR9 3374 aa15.23■□□□□ 0.03
TCOF1-215ENST00000515516 PER2O15055 1255 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 ZBTB39O15060 712 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 MBTPS2O43462 519 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 TBX10O75333 385 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 DGAT1O75907 488 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 ERLIN2O94905 339 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 ATF7P17544 494 aaPredicted RBP15.22■□□□□ 0.03
TCOF1-215ENST00000515516 ERVFC1P60507 584 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 PCBP1Q15365 356 aaKnown RBP eCLIP15.22■□□□□ 0.03
TCOF1-215ENST00000515516 SMAD2Q15796 467 aaKnown RBP15.22■□□□□ 0.03
TCOF1-215ENST00000515516 LONRF3Q496Y0 759 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 ADHFE1Q8IWW8 467 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 TMEM87AQ8NBN3 555 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 ERMNQ8TAM6 284 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 URGCPQ8TCY9 931 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 EPHX3Q9H6B9 360 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 UPF2Q9HAU5 1272 aaKnown RBP15.22■□□□□ 0.03
TCOF1-215ENST00000515516 NOL7Q9UMY1 257 aaKnown RBP15.22■□□□□ 0.03
TCOF1-215ENST00000515516 INPP5FQ9Y2H2 1132 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 PCDHB2Q9Y5E7 798 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 PCDHGC5Q9Y5F6 944 aa15.22■□□□□ 0.03
TCOF1-215ENST00000515516 FSCN2O14926 492 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 ZNF623O75123 536 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
TCOF1-215ENST00000515516 ALADP13716 330 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 COL9A1P20849 921 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 CA8P35219 290 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 PBX3P40426 434 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 BCAR1P56945 870 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 ORC2Q13416 577 aaPredicted RBP15.21■□□□□ 0.03
TCOF1-215ENST00000515516 ZNF174Q15697 407 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 DUSP6Q16828 381 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 C8orf34Q49A92 452 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 NOMO2Q5JPE7 1267 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 FBXO18Q8NFZ0 1043 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 LPPQ93052 612 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 TMEM169Q96HH4 297 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 CD320Q9NPF0 282 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 KIF3AQ9Y496 699 aa15.21■□□□□ 0.03
TCOF1-215ENST00000515516 POTEMA6NI47 508 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 PI4K2BG5E9Z4 385 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 WNT7AO00755 349 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 ST18O60284 1047 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 ZC3H11AO75152 810 aaKnown RBP eCLIP15.2■□□□□ 0.02
TCOF1-215ENST00000515516 AXLP30530 894 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 TECP42680 631 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 ZP2Q05996 745 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 COASYQ13057 564 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 SMC1AQ14683 1233 aaKnown RBP15.2■□□□□ 0.02
TCOF1-215ENST00000515516 RABEP1Q15276 862 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 TMEM31Q5JXX7 168 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 TTC38Q5R3I4 469 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 SLC39A11Q8N1S5 342 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 CNNM3Q8NE01 707 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 PIGOQ8TEQ8 1089 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 FAM193BQ96PV7 902 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-215ENST00000515516 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 TUFT1Q9NNX1 390 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 UBN1Q9NPG3 1134 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 BARX2Q9UMQ3 279 aaPredicted RBP15.2■□□□□ 0.02
TCOF1-215ENST00000515516 EVPLQ92817 2033 aa15.2■□□□□ 0.02
TCOF1-215ENST00000515516 TCF20Q9UGU0 1960 aaKnown RBP15.2■□□□□ 0.02
TCOF1-215ENST00000515516 NLRC5Q86WI3 1866 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 NT5C1B-RDH14C9J2C7 533 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 OFD1O75665 1012 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 EYA4O95677 639 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 OR52Z1P0C646 297 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 TRAPPC10P48553 1259 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 RARRES1P49788 294 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 PTENP60484 403 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 POU5F1BQ06416 359 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 NOTUMQ6P988 496 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 NOSTRINQ8IVI9 506 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 HACE1Q8IYU2 909 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 CCDC51Q96ER9 411 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 MSLNLQ96KJ4 702 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 NACC1Q96RE7 527 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 KIF2CQ99661 725 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 GBP3Q9H0R5 595 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 MINDY3Q9H8M7 445 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 RSAD1Q9HA92 442 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 XPNPEP1Q9NQW7 623 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 TBC1D13Q9NVG8 400 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 CLEC1BQ9P126 229 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 KANSL3Q9P2N6 904 aa15.19■□□□□ 0.02
TCOF1-215ENST00000515516 CNTNAP2Q9UHC6 1331 aa15.18■□□□□ 0.02
TCOF1-215ENST00000515516 USO1O60763 962 aaKnown RBP15.18■□□□□ 0.02
TCOF1-215ENST00000515516 CXCL14O95715 111 aa15.18■□□□□ 0.02
TCOF1-215ENST00000515516 ITGA4P13612 1032 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms