RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-223ENST00000514267 CERS3Q8IU89 383 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 MAGEB6Q8N7X4 407 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 TTC8Q8TAM2 541 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 MORC4Q8TE76 937 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 FBXO41Q8TF61 875 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 FUBP3Q96I24 572 aaKnown RBP eCLIP4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 LRRC37BQ96QE4 947 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 RHOBTB2Q9BYZ6 727 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 ZNF700Q9H0M5 742 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 SPTLC3Q9NUV7 552 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 OXSMQ9NWU1 459 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 UCKL1Q9NWZ5 548 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 SAE1Q9UBE0 346 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 SRRDQ9UH36 339 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 ST6GALNAC2Q9UJ37 374 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 PNMA8BQ9ULN7 279 aaPredicted RBP4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 SYNPO2Q9UMS6 1093 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 SPO11Q9Y5K1 396 aa4.47□□□□□ -1.69
CALCOCO2-223ENST00000514267 LOC102724159A0A0B4J2E5 919 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 TRIM75PA6NK02 468 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 PEX14O75381 377 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 SNUPNO95149 360 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 MPIG6BO95866 241 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 RBP3P10745 1247 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 VCAM1P19320 739 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 TNFRSF1AP19438 455 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 MC4RP32245 332 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 RHBDL3P58872 404 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 KRTAP10-2P60368 255 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 CD83Q01151 205 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 MOGSQ13724 837 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 UBE4AQ14139 1066 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 ICAM4Q14773 271 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 PWP2Q15269 919 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 PTPN21Q16825 1174 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 TTC38Q5R3I4 469 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 PHF19Q5T6S3 580 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 TIGD7Q6NT04 549 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 HDGFL2Q7Z4V5 671 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 RASSF3Q86WH2 238 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 CLRN3Q8NCR9 226 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 JPH3Q8WXH2 748 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 MPHOSPH9Q99550 1183 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 NUP88Q99567 741 aaPredicted RBP4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 KRTAP4-2Q9BYR5 136 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 C12orf65Q9H3J6 166 aaKnown RBP4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 ARNT2Q9HBZ2 717 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 KCMF1Q9P0J7 381 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 ANKRD6Q9Y2G4 727 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 GIT1Q9Y2X7 761 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 MRFAP1Q9Y605 127 aa4.46□□□□□ -1.7
CALCOCO2-223ENST00000514267 UBA6A0AVT1 1052 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 PRAMEF22A3QJZ6 481 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 CDC14BO60729 498 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 ZNF888P0CJ79 500 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 TACR2P21452 398 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 CCND1P24385 295 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 LSP1P33241 339 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 MRE11P49959 708 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 KIF11P52732 1056 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 LRRC32Q14392 662 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 MLC1Q15049 377 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 TERF2Q15554 542 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 MAN2A1Q16706 1144 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 DGKDQ16760 1214 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 ABCB5Q2M3G0 1257 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 MAP9Q49MG5 647 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 CATSPEREQ5SY80 951 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 TCTN3Q6NUS6 607 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 GGNQ86UU5 652 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 SMC5Q8IY18 1101 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 ZNF610Q8N9Z0 462 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 Q8TCH9 128 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 SH3RF3Q8TEJ3 882 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 PMM1Q92871 262 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 SLC7A6OSQ96CW6 309 aaPredicted RBP4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 MAML3Q96JK9 1138 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 AMNQ9BXJ7 453 aa4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 USP36Q9P275 1121 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 LUC7L2Q9Y383 392 aaKnown RBP4.45□□□□□ -1.7
CALCOCO2-223ENST00000514267 FZD9O00144 591 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 MATN3O15232 486 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 SLC26A4O43511 780 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 TGM5O43548 720 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 FZD7O75084 574 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 CT47B1P0C2W7 299 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 ZBTB48P10074 688 aaPredicted RBP4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 MYBL2P10244 700 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 ADCY8P40145 1251 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 IARSP41252 1262 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 GDF5P43026 501 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 RRADP55042 308 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 SMAD3P84022 425 aaKnown RBP4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 ZXDAP98168 799 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 BIRC2Q13490 618 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 GTF2H3Q13889 308 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 PCOLCEQ15113 449 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 SEC23AQ15436 765 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 GAGE13Q4V321 117 aa4.44□□□□□ -1.7
CALCOCO2-223ENST00000514267 BROXQ5VW32 411 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms