RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 TMX1Q9H3N1 280 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 RGS18Q9NS28 235 aa16.05■□□□□ 0.16
SNF8-212ENST00000514089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.04■□□□□ 0.16
SNF8-212ENST00000514089 A0A1B0GVL5 298 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 RBAK-RBAKDNI3L0D1 243 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 SKIP12755 728 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 PLS3P13797 630 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 IDEP14735 1019 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 STRN3Q13033 797 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 ARSHQ5FYA8 562 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 TMCO2Q7Z6W1 182 aaPredicted RBP16.04■□□□□ 0.16
SNF8-212ENST00000514089 TOP1MTQ969P6 601 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 CCDC34Q96HJ3 373 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 RAD9AQ99638 391 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 NFKBIZQ9BYH8 718 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 TRIM6Q9C030 488 aaPredicted RBP16.04■□□□□ 0.16
SNF8-212ENST00000514089 PARVGQ9HBI0 331 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 PRMT7Q9NVM4 692 aaPredicted RBP16.04■□□□□ 0.16
SNF8-212ENST00000514089 ODF2LQ9ULJ1 636 aa16.04■□□□□ 0.16
SNF8-212ENST00000514089 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.03■□□□□ 0.16
SNF8-212ENST00000514089 H0YCG3 227 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 AXLP30530 894 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 SYKP43405 635 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 NPTX2P47972 431 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 SARSP49591 514 aaKnown RBP16.03■□□□□ 0.16
SNF8-212ENST00000514089 PRPF4BQ13523 1007 aaKnown RBP16.03■□□□□ 0.16
SNF8-212ENST00000514089 FAM109BQ6ICB4 259 aaPredicted RBP16.03■□□□□ 0.16
SNF8-212ENST00000514089 NOTUMQ6P988 496 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 RTN4RL1Q86UN2 441 aaPredicted RBP16.03■□□□□ 0.16
SNF8-212ENST00000514089 ABI1Q8IZP0 508 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 FSIP1Q8NA03 581 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 BSNDQ8WZ55 320 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 DDX12PQ92771 950 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 TIFAQ96CG3 184 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 REEP2Q9BRK0 252 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 KIFC3Q9BVG8 833 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 MINDY3Q9H8M7 445 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 SLC28A3Q9HAS3 691 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 INSL6Q9Y581 213 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 PCDHA11Q9Y5I1 949 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 ALPK3Q96L96 1907 aa16.03■□□□□ 0.16
SNF8-212ENST00000514089 PHLPP2Q6ZVD8 1323 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 A0A087X0B3 334 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 SLC16A4O15374 487 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 MGEA5O60502 916 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 GJB5O95377 273 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 PRKCBP05771 671 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 PFKFB1P16118 471 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 MBTD1Q05BQ5 628 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 GIT2Q14161 759 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 NPAS4Q8IUM7 802 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 HACE1Q8IYU2 909 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 MRPS27Q92552 414 aaKnown RBP16.02■□□□□ 0.16
SNF8-212ENST00000514089 STAMQ92783 540 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 PBX4Q9BYU1 374 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 AGPAT5Q9NUQ2 364 aa16.02■□□□□ 0.16
SNF8-212ENST00000514089 PDE4DIPQ5VU43 2346 aa16.02■□□□□ 0.15
SNF8-212ENST00000514089 A0A1W2PQ27 194 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 A0A1W2PQ64 194 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 A0A1W2PQD8 194 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 TRAK2O60296 914 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 TSPAN1O60635 241 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 DNAJB2P25686 324 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 PBX2P40425 430 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 AFMP43652 599 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 NAALADL2Q58DX5 795 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 HERC4Q5GLZ8 1057 aaPredicted RBP16.01■□□□□ 0.15
SNF8-212ENST00000514089 ZNF697Q5TEC3 545 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 APBB1IPQ7Z5R6 666 aaPredicted RBP16.01■□□□□ 0.15
SNF8-212ENST00000514089 IFNLR1Q8IU57 520 aaPredicted RBP16.01■□□□□ 0.15
SNF8-212ENST00000514089 FAM178BQ8IXR5 827 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 CCDC65Q8IXS2 484 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 DAW1Q8N136 415 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 LRRC15Q8TF66 581 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 SPIRE2Q8WWL2 714 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 PGBD4Q96DM1 585 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 BICD1Q96G01 975 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 LRCH3Q96II8 777 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 CPB2Q96IY4 423 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 PRIMPOLQ96LW4 560 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 ADPGKQ9BRR6 497 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 TCHPQ9BT92 498 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 TNMDQ9H2S6 317 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 MAGEF1Q9HAY2 307 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 USP25Q9UHP3 1055 aa16.01■□□□□ 0.15
SNF8-212ENST00000514089 A0A0U1RQF3 1178 aa16■□□□□ 0.15
SNF8-212ENST00000514089 MYMKA6NI61 221 aa16■□□□□ 0.15
SNF8-212ENST00000514089 ACKR2O00590 384 aa16■□□□□ 0.15
SNF8-212ENST00000514089 HOXA2O43364 376 aa16■□□□□ 0.15
SNF8-212ENST00000514089 MYOGP15173 224 aa16■□□□□ 0.15
SNF8-212ENST00000514089 GAP43P17677 238 aa16■□□□□ 0.15
SNF8-212ENST00000514089 MATR3P43243 847 aaKnown RBP eCLIP16■□□□□ 0.15
SNF8-212ENST00000514089 RAB27AP51159 221 aa16■□□□□ 0.15
SNF8-212ENST00000514089 ASIC1P78348 528 aa16■□□□□ 0.15
SNF8-212ENST00000514089 BTG3Q14201 252 aaPredicted RBP16■□□□□ 0.15
SNF8-212ENST00000514089 DSC3Q14574 896 aa16■□□□□ 0.15
SNF8-212ENST00000514089 LONRF3Q496Y0 759 aa16■□□□□ 0.15
SNF8-212ENST00000514089 SPOUT1Q5T280 376 aaKnown RBP16■□□□□ 0.15
SNF8-212ENST00000514089 PPP2R2DQ66LE6 453 aa16■□□□□ 0.15
SNF8-212ENST00000514089 CDCA2Q69YH5 1023 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms