RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 NELL1Q92832 810 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 PHKBQ93100 1093 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 SCLT1Q96NL6 688 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 NELL2Q99435 816 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 DDX23Q9BUQ8 820 aaKnown RBP12.31□□□□□ -0.44
NFKB1-211ENST00000513803 TRAIPQ9BWF2 469 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 VN1R3Q9BXE9 311 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 PARD6AQ9NPB6 346 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 NUMBLQ9Y6R0 609 aa12.31□□□□□ -0.44
NFKB1-211ENST00000513803 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-211ENST00000513803 MEIS1O00470 390 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 GLUD1P00367 558 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 ATP4AP20648 1035 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 SLC11A1P49279 550 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 CLCN3P51790 818 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 AK2P54819 239 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 SLC44A4Q53GD3 710 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 ZBTB41Q5SVQ8 909 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 RSPO2Q6UXX9 243 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-211ENST00000513803 TRMT1LQ7Z2T5 733 aaKnown RBP12.3□□□□□ -0.44
NFKB1-211ENST00000513803 RPS6KC1Q96S38 1066 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 GBP3Q9H0R5 595 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 INPP5FQ9Y2H2 1132 aa12.3□□□□□ -0.44
NFKB1-211ENST00000513803 MAFBQ9Y5Q3 323 aaPredicted RBP12.3□□□□□ -0.44
NFKB1-211ENST00000513803 C2orf16Q68DN1 1984 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 DDX39AO00148 427 aaKnown RBP12.29□□□□□ -0.44
NFKB1-211ENST00000513803 C2CD2LO14523 706 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 LRP3O75074 770 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 RFPL2O75678 378 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 C1RP00736 705 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 FOSP01100 380 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-211ENST00000513803 URODP06132 367 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 ZNF76P36508 570 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 NRLP54845 237 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 PFKPQ01813 784 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 SPEM2Q0P670 501 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 MLF2Q15773 248 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-211ENST00000513803 RALYLQ86SE5 291 aaKnown RBP12.29□□□□□ -0.44
NFKB1-211ENST00000513803 CELF5Q8N6W0 485 aaKnown RBP12.29□□□□□ -0.44
NFKB1-211ENST00000513803 PLEKHA4Q9H4M7 779 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 KANSL3Q9P2N6 904 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 DNAJB4Q9UDY4 337 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 FAN1Q9Y2M0 1017 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 MTF2Q9Y483 593 aaPredicted RBP12.29□□□□□ -0.44
NFKB1-211ENST00000513803 DOCK8Q8NF50 2099 aa12.29□□□□□ -0.44
NFKB1-211ENST00000513803 TEX28O15482 410 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 GAS2O43903 313 aaKnown RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 FOXD2O60548 495 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 ZNF623O75123 536 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 OFD1O75665 1012 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 PAPLNO95428 1278 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 SOD2P04179 222 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 RETP07949 1114 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 GPC3P51654 580 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 LONRF3Q496Y0 759 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 LAIR1Q6GTX8 287 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 GET4Q7L5D6 327 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 ZNF280BQ86YH2 543 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 TEX2Q8IWB9 1127 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 URGCPQ8TCY9 931 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 NLRP7Q8WX94 980 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 LPPQ93052 612 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 CLDN23Q96B33 292 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 ZNF707Q96C28 371 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 PGBD4Q96DM1 585 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 ZNF668Q96K58 619 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 FAM193BQ96PV7 902 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 TMEM175Q9BSA9 504 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 RPP25Q9BUL9 199 aaKnown RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 GCOM2Q9BZD3 368 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 NT5C3AQ9H0P0 336 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 LTB4R2Q9NPC1 389 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 ZDHHC7Q9NXF8 308 aa12.28□□□□□ -0.44
NFKB1-211ENST00000513803 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
NFKB1-211ENST00000513803 LAMA4Q16363 1823 aa12.27□□□□□ -0.44
NFKB1-211ENST00000513803 DDAH1O94760 285 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 PSAPP07602 524 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 MYBP10242 640 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 FGFR4P22455 802 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 RPS9P46781 194 aaKnown RBP12.27□□□□□ -0.45
NFKB1-211ENST00000513803 RAB27AP51159 221 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 SHC2P98077 582 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 PPP2R5DQ14738 602 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 TSSK4Q6SA08 328 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 MTSS1LQ765P7 747 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 NIPA1Q7RTP0 329 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 LRRC71Q8N4P6 559 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 SRBD1Q8N5C6 995 aaKnown RBP12.27□□□□□ -0.45
NFKB1-211ENST00000513803 LINC01465Q8N7H1 131 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 NCOA7Q8NI08 942 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 IGDCC4Q8TDY8 1250 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 FAM167AQ96KS9 214 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 PRKD2Q9BZL6 878 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 RXFP1Q9HBX9 757 aa12.27□□□□□ -0.45
NFKB1-211ENST00000513803 NRBP2Q9NSY0 501 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms