RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 GOLGA8RI6L899 631 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 PHF2O75151 1096 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 NCF2P19878 526 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 TMPRSS15P98073 1019 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 PDIA5Q14554 519 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 TTMPQ5BVD1 217 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 IZUMO3Q5VZ72 239 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 ZBED8Q8IZ13 594 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 PDIK1LQ8N165 341 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 AGPAT1Q99943 283 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 FAM205AQ6ZU69 1335 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 EMSYQ7Z589 1322 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 ATMINO43313 823 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 POLR2BP30876 1174 aaKnown RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 KCTD19Q17RG1 926 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 KLHDC7AQ5VTJ3 777 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 DARS2Q6PI48 645 aaKnown RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 EPS8L3Q8TE67 593 aaKnown RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 WNT8AQ9H1J5 351 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 ADAM22Q9P0K1 906 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 SEPT9Q9UHD8 586 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 TRPC6Q9Y210 931 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 MCF2LO15068 1137 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 ZBED4O75132 1171 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 VAMP7P51809 220 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 POLGP54098 1239 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 GPS1Q13098 491 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 PLCB4Q15147 1175 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 KYNUQ16719 465 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 ZNF394Q53GI3 561 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 C4orf33Q8N1A6 199 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 TPCN2Q8NHX9 752 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 SLC30A5Q8TAD4 765 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 KBTBD4Q9NVX7 518 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 CCDC195A0A1B0GUA6 201 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 CYP26A1O43174 497 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 ANP32DO95626 131 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 QRICH1Q2TAL8 776 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 C1orf146Q5VVC0 180 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 SUGP1Q8IWZ8 645 aaKnown RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 CALR3Q96L12 384 aaKnown RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 CEP170P1Q96L14 293 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 MPHOSPH6Q99547 160 aaKnown RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 REEP2Q9BRK0 252 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 BATF3Q9NR55 127 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 BCAP29Q9UHQ4 241 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 MAGED2Q9UNF1 606 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 CPP00450 1065 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 TMEM191BP0C7N4 346 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 CCND1P24385 295 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 ORC2Q13416 577 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 TMED1Q13445 227 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 SMIM5Q71RC9 77 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 ST13P4Q8IZP2 240 aaPredicted RBP8.29□□□□□ -1.08
CLCN3-209ENST00000513761 XXYLT1Q8NBI6 393 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 SCYL1Q96KG9 808 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 TLR10Q9BXR5 811 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 NAGPAQ9UK23 515 aa8.29□□□□□ -1.08
CLCN3-209ENST00000513761 MROH1Q8NDA8 1641 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 RFC1P35251 1148 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 ARFIP2P53365 341 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SH3BGRP55822 239 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 PDIA2Q13087 525 aaKnown RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CSRNP1Q96S65 589 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SH3GL3Q99963 347 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SMYD2Q9NRG4 433 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 KLHL11Q9NVR0 708 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 NOP56O00567 594 aaKnown RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 PDXKO00764 312 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 KCTD6Q8NC69 237 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 NEDD1Q8NHV4 660 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CENPKQ9BS16 269 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 NPHS2Q9NP85 383 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 ALG6Q9Y672 507 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 IQANK1A0A1B0GTG1 560 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CFLARO15519 480 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CRCPO75575 148 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 AKR1B1P15121 316 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 STAT2P52630 851 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 EPHB1P54762 984 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SEC23AQ15436 765 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 TRIM42Q8IWZ5 723 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CCDC97Q96F63 343 aaPredicted RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 EIF2AK1Q9BQI3 630 aaKnown RBP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SPECC1L-ADORA2AF8WAN1 911 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SLC16A4O15374 487 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SLC37A4O43826 429 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 TJP3O95049 919 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 ITGA4P13612 1032 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CAV1Q03135 178 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 GRB10Q13322 594 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 AP3B2Q13367 1082 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 MDH1BQ5I0G3 518 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 FAM182BQ5T319 152 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 SCARA5Q6ZMJ2 495 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 CDAN1Q8IWY9 1227 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.28□□□□□ -1.08
CLCN3-209ENST00000513761 RNF34Q969K3 372 aa8.28□□□□□ -1.08
CLCN3-209ENST00000513761 STK33Q9BYT3 514 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms