RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 HOXA6P31267 233 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 FGD1P98174 961 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 SLFN5Q08AF3 891 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 SCAPQ12770 1279 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 QRICH1Q2TAL8 776 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 HEATR6Q6AI08 1181 aaKnown RBP10.82□□□□□ -0.68
CLCN3-208ENST00000512813 WDR5BQ86VZ2 330 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 SPEM1Q8N4L4 309 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 HELQQ8TDG4 1101 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 RSPH1Q8WYR4 309 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 DNASE1L2Q92874 299 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 KXD1Q9BQD3 176 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 NT5C3AQ9H0P0 336 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 SMARCAD1Q9H4L7 1026 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 CDHR5Q9HBB8 845 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 GINS2Q9Y248 185 aa10.82□□□□□ -0.68
CLCN3-208ENST00000512813 COL4A2P08572 1712 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 MAN2B1O00754 1011 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 MRPS9P82933 396 aaKnown RBP10.81□□□□□ -0.68
CLCN3-208ENST00000512813 GAS6Q14393 721 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 CACNA2D4Q7Z3S7 1137 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 SAMD3Q8N6K7 520 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 PRKD2Q9BZL6 878 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 UBA5Q9GZZ9 404 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 NAPBQ9H115 298 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 ADAMTS10Q9H324 1103 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 CLMPQ9H6B4 373 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 LMAN1LQ9HAT1 526 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 MRPL17Q9NRX2 175 aaKnown RBP10.81□□□□□ -0.68
CLCN3-208ENST00000512813 FRMPD4Q14CM0 1322 aa10.81□□□□□ -0.68
CLCN3-208ENST00000512813 LNP1A1A4G5 178 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 H0Y626 953 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 ATXN7O15265 892 aaPredicted RBP10.8□□□□□ -0.68
CLCN3-208ENST00000512813 MAP3K13O43283 966 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 ORC4O43929 436 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 TRIM16O95361 564 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 C1RP00736 705 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 NTRK1P04629 796 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 SSBP05455 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLCN3-208ENST00000512813 GOLGA8HP0CJ92 632 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 HOXA13P31271 388 aaPredicted RBP10.8□□□□□ -0.68
CLCN3-208ENST00000512813 HSP90AB4PQ58FF6 505 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 ZNF598Q86UK7 904 aaKnown RBP10.8□□□□□ -0.68
CLCN3-208ENST00000512813 KBTBD6Q86V97 674 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 ADGRF4Q8IZF3 695 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 ZNF843Q8N446 348 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 RNF169Q8NCN4 708 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 GIMAP8Q8ND71 665 aaPredicted RBP10.8□□□□□ -0.68
CLCN3-208ENST00000512813 DEFB124Q8NES8 71 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 TRAPPC12Q8WVT3 735 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 GAB3Q8WWW8 586 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 FGF13Q92913 245 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 PLEKHA4Q9H4M7 779 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 TCP11L1Q9NUJ3 509 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 TNNQ9UQP3 1299 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 WDR81Q562E7 1941 aa10.8□□□□□ -0.68
CLCN3-208ENST00000512813 MTCL1Q9Y4B5 1905 aaKnown RBP10.8□□□□□ -0.68
CLCN3-208ENST00000512813 GSTTP1A0A1W2PQM5 241 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 M0R2C6 588 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 TEX28O15482 410 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 RPP40O75818 363 aaKnown RBP10.79□□□□□ -0.68
CLCN3-208ENST00000512813 URODP06132 367 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 GALTP07902 379 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 MYBP10242 640 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 PLCB4Q15147 1175 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 MTHFD1LQ6UB35 978 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 SEPT1Q8WYJ6 367 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 TNPO1Q92973 898 aaKnown RBP10.79□□□□□ -0.68
CLCN3-208ENST00000512813 RPS6KC1Q96S38 1066 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 CCDC86Q9H6F5 360 aaKnown RBP10.79□□□□□ -0.68
CLCN3-208ENST00000512813 TMEM9BQ9NQ34 198 aa10.79□□□□□ -0.68
CLCN3-208ENST00000512813 ABCA12Q86UK0 2595 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 DOPEY1Q5JWR5 2465 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 CHRNB1P11230 501 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 CRYBB1P53674 252 aaPredicted RBP10.78□□□□□ -0.68
CLCN3-208ENST00000512813 CTDSPL2Q05D32 466 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 LSM14AQ8ND56 463 aaKnown RBP10.78□□□□□ -0.68
CLCN3-208ENST00000512813 KIF1BPQ96EK5 621 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 ZC3H10Q96K80 434 aaKnown RBP10.78□□□□□ -0.68
CLCN3-208ENST00000512813 OSMRQ99650 979 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 NRDE2Q9H7Z3 1164 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 RAXQ9Y2V3 346 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 DOCK6Q96HP0 2047 aa10.78□□□□□ -0.68
CLCN3-208ENST00000512813 ASCC3Q8N3C0 2202 aaKnown RBP10.78□□□□□ -0.68
CLCN3-208ENST00000512813 SHROOM3Q8TF72 1996 aa10.77□□□□□ -0.68
CLCN3-208ENST00000512813 URB1O60287 2271 aaKnown RBP10.77□□□□□ -0.69
CLCN3-208ENST00000512813 A0A0U1RQF3 1178 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 PCNX2A6NKB5 2137 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 ECI2O75521 394 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 AKAP3O75969 853 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 FGRP09769 529 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 ZSCAN20P17040 1043 aaPredicted RBP10.77□□□□□ -0.69
CLCN3-208ENST00000512813 SLC11A1P49279 550 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 AK2P54819 239 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 PTGDRQ13258 359 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 CEP85Q6P2H3 762 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 ZNF280BQ86YH2 543 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 KIAA0319LQ8IZA0 1049 aa10.77□□□□□ -0.69
CLCN3-208ENST00000512813 KBTBD3Q8NAB2 608 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms