RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 XBP1P17861 261 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 ALDH7A1P49419 539 aaKnown RBP16.31■□□□□ 0.2
LETM1-207ENST00000512669 FOSBP53539 338 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 EFCAB12Q6NXP0 572 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 LRRC55Q6ZSA7 311 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 SLC39A11Q8N1S5 342 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 LRRC71Q8N4P6 559 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 KREMEN2Q8NCW0 462 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 SCLT1Q96NL6 688 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 NIFKQ9BYG3 293 aaKnown RBP16.31■□□□□ 0.2
LETM1-207ENST00000512669 ADAMTS10Q9H324 1103 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 RNF19AQ9NV58 838 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 HCFC2Q9Y5Z7 792 aa16.31■□□□□ 0.2
LETM1-207ENST00000512669 C2orf71A6NGG8 1288 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 PROB1E7EW31 1015 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
LETM1-207ENST00000512669 KRT2P35908 639 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 PPP2R5CQ13362 524 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 DRP2Q13474 957 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 TMEM87AQ8NBN3 555 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 TMEM169Q96HH4 297 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 FAM20AQ96MK3 541 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 SH2D3AQ9BRG2 576 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 CHST12Q9NRB3 414 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 TSHZ2Q9NRE2 1034 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 WRAP73Q9P2S5 460 aaPredicted RBP16.3■□□□□ 0.2
LETM1-207ENST00000512669 STK39Q9UEW8 545 aa16.3■□□□□ 0.2
LETM1-207ENST00000512669 WDR81Q562E7 1941 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 CCNT1O60563 726 aaKnown RBP16.29■□□□□ 0.2
LETM1-207ENST00000512669 SKIP12755 728 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 DARSP14868 501 aaKnown RBP16.29■□□□□ 0.2
LETM1-207ENST00000512669 GCFC2P16383 781 aaKnown RBP16.29■□□□□ 0.2
LETM1-207ENST00000512669 GPC3P51654 580 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 FOXK2Q01167 660 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 SPIRE1Q08AE8 756 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 POTEDQ86YR6 584 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 CCDC83Q8IWF9 413 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 PLCD3Q8N3E9 789 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 TDRD5Q8NAT2 981 aaKnown RBP16.29■□□□□ 0.2
LETM1-207ENST00000512669 RNF169Q8NCN4 708 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 ZNF668Q96K58 619 aaPredicted RBP16.29■□□□□ 0.2
LETM1-207ENST00000512669 APOL5Q9BWW9 433 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 POMKQ9H5K3 350 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 USTQ9Y2C2 406 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 IRAK3Q9Y616 596 aa16.29■□□□□ 0.2
LETM1-207ENST00000512669 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
LETM1-207ENST00000512669 ZFHX2Q9C0A1 2572 aaPredicted RBP16.29■□□□□ 0.2
LETM1-207ENST00000512669 IGKV6-21A0A0C4DH24 114 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 CLASP2O75122 1294 aaKnown RBP16.28■□□□□ 0.2
LETM1-207ENST00000512669 PBX3P40426 434 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 RBM25P49756 843 aaKnown RBP16.28■□□□□ 0.2
LETM1-207ENST00000512669 POLGP54098 1239 aaPredicted RBP16.28■□□□□ 0.2
LETM1-207ENST00000512669 TBC1D8BQ0IIM8 1120 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 XKR3Q5GH77 459 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 CLLU1OSQ5K130 101 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 KIAA1841Q6NSI8 718 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 ANO5Q75V66 913 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 ZNF598Q86UK7 904 aaKnown RBP16.28■□□□□ 0.2
LETM1-207ENST00000512669 DIS3L2Q8IYB7 885 aaKnown RBP16.28■□□□□ 0.2
LETM1-207ENST00000512669 ZDHHC14Q8IZN3 488 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 ZNF579Q8NAF0 562 aaKnown RBP16.28■□□□□ 0.2
LETM1-207ENST00000512669 NLRP7Q8WX94 980 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 TRAIPQ9BWF2 469 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 FAM86C1Q9NVL1 165 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 MYO10Q9HD67 2058 aa16.28■□□□□ 0.2
LETM1-207ENST00000512669 C2CD4DB7Z1M9 353 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 TBX3O15119 743 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 SFPQP23246 707 aaKnown RBP eCLIP16.27■□□□□ 0.2
LETM1-207ENST00000512669 SP100P23497 879 aaPredicted RBP16.27■□□□□ 0.2
LETM1-207ENST00000512669 CA8P35219 290 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 BCAR1P56945 870 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 PSMC5P62195 406 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 MTERF2Q49AM1 385 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 ATAT1Q5SQI0 421 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 PPFIBP1Q86W92 1011 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 HELQQ8TDG4 1101 aa16.27■□□□□ 0.2
LETM1-207ENST00000512669 GCOM2Q9BZD3 368 aaPredicted RBP16.27■□□□□ 0.2
LETM1-207ENST00000512669 INO80BQ9C086 356 aaPredicted RBP16.27■□□□□ 0.2
LETM1-207ENST00000512669 SEPT9Q9UHD8 586 aaPredicted RBP16.27■□□□□ 0.2
LETM1-207ENST00000512669 RIF1Q5UIP0 2472 aaKnown RBP16.26■□□□□ 0.19
LETM1-207ENST00000512669 FAM186AA6NE01 2351 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.26■□□□□ 0.19
LETM1-207ENST00000512669 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 CXCL14O95715 111 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 DNM2P50570 870 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 RAB27AP51159 221 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 NPEPPSP55786 919 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 GUCY1B3Q02153 619 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 PLA2G4FQ68DD2 849 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 DDX53Q86TM3 631 aaKnown RBP16.26■□□□□ 0.19
LETM1-207ENST00000512669 ZBP1Q9H171 429 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 RGL1Q9NZL6 768 aa16.26■□□□□ 0.19
LETM1-207ENST00000512669 PLXNA3P51805 1871 aa16.25■□□□□ 0.19
LETM1-207ENST00000512669 H0Y858 1186 aa16.25■□□□□ 0.19
LETM1-207ENST00000512669 ZBTB39O15060 712 aa16.25■□□□□ 0.19
LETM1-207ENST00000512669 BRD1O95696 1058 aa16.25■□□□□ 0.19
LETM1-207ENST00000512669 PDGFBP01127 241 aaPredicted RBP16.25■□□□□ 0.19
LETM1-207ENST00000512669 CTSAP10619 480 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms