RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 RNF25Q96BH1 459 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-207ENST00000512462 IQCDQ96DY2 449 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 DNAJC7Q99615 494 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 FAM49AQ9H0Q0 323 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-207ENST00000512462 TTLL3Q9Y4R7 772 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 BZW2Q9Y6E2 419 aaKnown RBP12.87□□□□□ -0.35
PRDM16-207ENST00000512462 IKBKGQ9Y6K9 419 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 MYH14Q7Z406 1995 aaKnown RBP12.87□□□□□ -0.35
PRDM16-207ENST00000512462 POC1B-GALNT4F8VUJ3 575 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 MEIS2O14770 477 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 LIN9Q5TKA1 542 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 DLK2Q6UY11 383 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 CBWD2Q8IUF1 395 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 C7orf31Q8N865 590 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 MTMR9Q96QG7 549 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 MSTO1Q9BUK6 570 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
PRDM16-207ENST00000512462 AKT3Q9Y243 479 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 PI4K2BG5E9Z4 385 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 NR3C2P08235 984 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 LACTBP83111 547 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-207ENST00000512462 IFRD2Q12894 506 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-207ENST00000512462 CDO1Q16878 200 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 SGO2Q562F6 1265 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 ARFGAP2Q8N6H7 521 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 SYT2Q8N9I0 419 aaPredicted RBP12.87□□□□□ -0.35
PRDM16-207ENST00000512462 LRRC15Q8TF66 581 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 CPA5Q8WXQ8 436 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 MED4Q9NPJ6 270 aa12.87□□□□□ -0.35
PRDM16-207ENST00000512462 F5H423 210 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 FOXN3O00409 490 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 PDXKO00764 312 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 SART1O43290 800 aaKnown RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 ENTPD3O75355 529 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 MYCP01106 439 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 KRT15P19012 456 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 IFT88Q13099 833 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 EGFL6Q8IUX8 553 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 DNAJC18Q9H819 358 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 HSPBP1Q9NZL4 362 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 HACL1Q9UJ83 578 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 REXO2Q9Y3B8 237 aaKnown RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 ARAP2Q8WZ64 1704 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 GAKO14976 1311 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 CCND2P30279 289 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 HOXA10P31260 410 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 GUCY1A3Q02108 690 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 EPHA7Q15375 998 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 ZNF571Q7Z3V5 609 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 LRRC71Q8N4P6 559 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 DHX38Q92620 1227 aaKnown RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 IWS1Q96ST2 819 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 TMEM206Q9H813 350 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 STK24Q9Y6E0 443 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 GOLGA8MH3BSY2 632 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 WNT10BO00744 389 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 PON1P27169 355 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 CAP2P40123 477 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 GPR162Q16538 588 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 KLHDC7AQ5VTJ3 777 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 IL31RAQ8NI17 732 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 SPATA20Q8TB22 786 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 KAT5Q92993 513 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 ACSF2Q96CM8 615 aaPredicted RBP12.86□□□□□ -0.35
PRDM16-207ENST00000512462 PSMD1Q99460 953 aa12.86□□□□□ -0.35
PRDM16-207ENST00000512462 ANO9A1A5B4 782 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 RAD51CO43502 376 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 ORC1Q13415 861 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 CRY2Q49AN0 593 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 MICALCLQ6ZW33 695 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 MPHOSPH6Q99547 160 aaKnown RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 RAB17Q9H0T7 212 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 POLR3FQ9H1D9 316 aaPredicted RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 AGPAT3Q9NRZ7 376 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 MYO5AQ9Y4I1 1855 aaKnown RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 DDX60Q8IY21 1712 aaKnown RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 FGRP09769 529 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 SOX5P35711 763 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 DR1Q01658 176 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 KCTD2Q14681 263 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 MIIPQ5JXC2 388 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 BEND6Q5SZJ8 279 aaPredicted RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 INTS8Q75QN2 995 aaKnown RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 SH3BP5LQ7L8J4 393 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 ZNF354CQ86Y25 554 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 CCDC63Q8NA47 563 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 SLC20A1Q8WUM9 679 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 FAM163AQ96GL9 167 aaPredicted RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 ZNF233A6NK53 670 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 TRIM66O15016 1216 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 YARSP54577 528 aaKnown RBP12.85□□□□□ -0.35
PRDM16-207ENST00000512462 BFSP1Q12934 665 aa12.85□□□□□ -0.35
PRDM16-207ENST00000512462 ICE2Q659A1 982 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms