RNA–Protein interactions for RNA: ENST00000512334.5

DDX41-214, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-214ENST00000512334 USP28Q96RU2 1077 aa17.62■□□□□ 0.41
DDX41-214ENST00000512334 POLD4Q9HCU8 107 aa17.62■□□□□ 0.41
DDX41-214ENST00000512334 RALGAPA2Q2PPJ7 1873 aa17.62■□□□□ 0.41
DDX41-214ENST00000512334 COL6A3P12111 3177 aa17.62■□□□□ 0.41
DDX41-214ENST00000512334 FNDC1Q4ZHG4 1894 aaPredicted RBP17.61■□□□□ 0.41
DDX41-214ENST00000512334 LPXNO60711 386 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 EOMESO95936 686 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 ZSCAN22P10073 491 aaPredicted RBP17.61■□□□□ 0.41
DDX41-214ENST00000512334 SKIP12755 728 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 BMPR1AP36894 532 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 MBTD1Q05BQ5 628 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 GPM6BQ13491 265 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 PPP2R5AQ15172 486 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 PCBP1Q15365 356 aaKnown RBP eCLIP17.61■□□□□ 0.41
DDX41-214ENST00000512334 LONRF3Q496Y0 759 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 IFNLR1Q8IU57 520 aaPredicted RBP17.61■□□□□ 0.41
DDX41-214ENST00000512334 DEPTORQ8TB45 409 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 BSNDQ8WZ55 320 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 KIFAP3Q92845 792 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 CLP1Q92989 425 aaKnown RBP17.61■□□□□ 0.41
DDX41-214ENST00000512334 CPB2Q96IY4 423 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 ZNF396Q96N95 335 aaPredicted RBP17.61■□□□□ 0.41
DDX41-214ENST00000512334 NFKBIZQ9BYH8 718 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 TMEM117Q9H0C3 514 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 FAM105AQ9NUU6 356 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 MTCH2Q9Y6C9 303 aa17.61■□□□□ 0.41
DDX41-214ENST00000512334 TSPAN1O60635 241 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 HIP1RO75146 1068 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 PLA2G4BP0C869 781 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 AXLP30530 894 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 RAB27AP51159 221 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 KARSQ15046 597 aaKnown RBP17.6■□□□□ 0.41
DDX41-214ENST00000512334 FOXD4L6Q3SYB3 417 aaPredicted RBP17.6■□□□□ 0.41
DDX41-214ENST00000512334 TMEM119Q4V9L6 283 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 SPECC1Q5M775 1068 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 RINT1Q6NUQ1 792 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 NOTUMQ6P988 496 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 FOXD4L3Q6VB84 417 aaPredicted RBP17.6■□□□□ 0.41
DDX41-214ENST00000512334 ZNF598Q86UK7 904 aaKnown RBP17.6■□□□□ 0.41
DDX41-214ENST00000512334 KCTD17Q8N5Z5 321 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 HELQQ8TDG4 1101 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 RUSC1Q9BVN2 902 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 TRAIPQ9BWF2 469 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 CSRNP2Q9H175 543 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 C2orf40Q9H1Z8 148 aa17.6■□□□□ 0.41
DDX41-214ENST00000512334 FBXO2Q9UK22 296 aaPredicted RBP17.6■□□□□ 0.41
DDX41-214ENST00000512334 SRPRBQ9Y5M8 271 aaKnown RBP17.6■□□□□ 0.41
DDX41-214ENST00000512334 MYH15Q9Y2K3 1946 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 H3BNC9 293 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 SLC26A4O43511 780 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 F13A1P00488 732 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 RB1P06400 928 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 LINC00271P0C7V0 271 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 ATF7P17544 494 aaPredicted RBP17.59■□□□□ 0.41
DDX41-214ENST00000512334 LIG1P18858 919 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 HOXA11P31270 313 aaPredicted RBP17.59■□□□□ 0.41
DDX41-214ENST00000512334 NAMPTP43490 491 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 RAD51AP2Q09MP3 1159 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 STK38Q15208 465 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 TMEM132AQ24JP5 1023 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 CDCA2Q69YH5 1023 aaPredicted RBP17.59■□□□□ 0.41
DDX41-214ENST00000512334 LPPQ93052 612 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 CLIC6Q96NY7 704 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 CASD1Q96PB1 797 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 C11orf84Q9BUA3 381 aaPredicted RBP17.59■□□□□ 0.41
DDX41-214ENST00000512334 RNF19AQ9NV58 838 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 HCSTQ9UBK5 93 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 PCDHB2Q9Y5E7 798 aa17.59■□□□□ 0.41
DDX41-214ENST00000512334 KIAA1671Q9BY89 1806 aa17.58■□□□□ 0.41
DDX41-214ENST00000512334 CCDC169A6NNP5 214 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 C5orf67F2Z3F1 127 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 B4GALT5O43286 388 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 PLCG1P19174 1290 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 POU3F3P20264 500 aaPredicted RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 TXLNAP40222 546 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 PKP1Q13835 747 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 BECN1Q14457 450 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 DHX8Q14562 1220 aaKnown RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 SLC39A14Q15043 492 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 SKIV2LQ15477 1246 aaKnown RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 PTPROQ16827 1216 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 CLLU1OSQ5K130 101 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 C1orf186Q6ZWK4 172 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 LRRC43Q8N309 656 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 SYT2Q8N9I0 419 aaPredicted RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 PGBD4Q96DM1 585 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 EPSTI1Q96J88 318 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 DRC1Q96MC2 740 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 KIFC3Q9BVG8 833 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 PLVAPQ9BX97 442 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 TRIM6Q9C030 488 aaPredicted RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 AAASQ9NRG9 546 aa17.58■□□□□ 0.4
DDX41-214ENST00000512334 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 PRMT7Q9NVM4 692 aaPredicted RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 TFIP11Q9UBB9 837 aaKnown RBP17.58■□□□□ 0.4
DDX41-214ENST00000512334 ZNF623O75123 536 aa17.57■□□□□ 0.4
DDX41-214ENST00000512334 CSPG5O95196 566 aa17.57■□□□□ 0.4
DDX41-214ENST00000512334 PRKCBP05771 671 aa17.57■□□□□ 0.4
DDX41-214ENST00000512334 ARF4P18085 180 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms