RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 SRRM3A6NNA2 597 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 HMGB1P1B2RPK0 211 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 K7ENM7 598 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 FOXN3O00409 490 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 DDX3YO15523 660 aaKnown RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 KRT14P02533 472 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 INPP5BP32019 993 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 SLC20A2Q08357 652 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 EPC2Q52LR7 807 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 SPDYCQ5MJ68 293 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 FOXR1Q6PIV2 292 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 XXYLT1Q8NBI6 393 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 AGPAT1Q99943 283 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 GLIS2Q9BZE0 524 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 FAM107BQ9H098 131 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 VEZTQ9HBM0 779 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 COL20A1Q9P218 1284 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 GRIN2DO15399 1336 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 PHF20L1A8MW92 1017 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 ZEB2O60315 1214 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 GUCY2FP51841 1108 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 IRX5P78411 483 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 MRPS9P82933 396 aaKnown RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 ITGB3BPQ13352 177 aaPredicted RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 MTMR3Q13615 1198 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 TRADDQ15628 312 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 ZYXQ15942 572 aaKnown RBP10.01□□□□□ -0.81
CPNE4-210ENST00000512332 MIGA2Q7L4E1 593 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 DNAAF5Q86Y56 855 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 ATP6V1G3Q96LB4 118 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 AP1M1Q9BXS5 423 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 KIAA1683Q9H0B3 1180 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 SLC38A10Q9HBR0 1119 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 OSGEPQ9NPF4 335 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 FAM114A2Q9NRY5 505 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 RSPH14Q9UHP6 348 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 PPP1R9AQ9ULJ8 1098 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 ZNRF3Q9ULT6 936 aa10.01□□□□□ -0.81
CPNE4-210ENST00000512332 EMSYQ7Z589 1322 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 MIF4GDA9UHW6 222 aaKnown RBP10□□□□□ -0.81
CPNE4-210ENST00000512332 H0YGN5 161 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 NFIBO00712 420 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 FDX1P10109 184 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 GZMAP12544 262 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 YWHABP31946 246 aaKnown RBP10□□□□□ -0.81
CPNE4-210ENST00000512332 SFNP31947 248 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 PTENP60484 403 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 MTMR1Q13613 665 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 C11orf63Q6NUN7 778 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 HAUS6Q7Z4H7 955 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 CDAN1Q8IWY9 1227 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 SYTL5Q8TDW5 730 aaPredicted RBP10□□□□□ -0.81
CPNE4-210ENST00000512332 MORC4Q8TE76 937 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 HVCN1Q96D96 273 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 DDX47Q9H0S4 455 aaKnown RBP10□□□□□ -0.81
CPNE4-210ENST00000512332 UBE2TQ9NPD8 197 aaPredicted RBP10□□□□□ -0.81
CPNE4-210ENST00000512332 ANKEF1Q9NU02 776 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 HSPBP1Q9NZL4 362 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 FEZ2Q9UHY8 353 aaPredicted RBP10□□□□□ -0.81
CPNE4-210ENST00000512332 ZBTB12Q9Y330 459 aaPredicted RBP10□□□□□ -0.81
CPNE4-210ENST00000512332 NFS1Q9Y697 457 aa10□□□□□ -0.81
CPNE4-210ENST00000512332 MTA2O94776 668 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 HSPA6P17066 643 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 HSD17B3P37058 310 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 JAK3P52333 1124 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 DRG2P55039 364 aaKnown RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 NCKAP1LP55160 1127 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 PSMC5P62195 406 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 GNGT1P63211 74 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 DLG4P78352 724 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 ENPEPQ07075 957 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 PPP3CAQ08209 521 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 HLTFQ14527 1009 aaKnown RBP eCLIP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 ARHGAP44Q17R89 818 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 C1orf220Q5T0J3 134 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 XRRA1Q6P2D8 792 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 RDM1Q8NG50 284 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 IL31RAQ8NI17 732 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 ZFP91Q96JP5 570 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 RPS6KC1Q96S38 1066 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 ZNF341Q9BYN7 854 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 THAP2Q9H0W7 228 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 TMBIM4Q9HC24 238 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 AMACRQ9UHK6 382 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 LCMT1Q9UIC8 334 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 PLAAQ9Y263 795 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 UTP11Q9Y3A2 253 aaKnown RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 DDX39AO00148 427 aaKnown RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 TULP1O00294 542 aaPredicted RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 FGGP02679 453 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 ITGA4P13612 1032 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 CORO7P57737 925 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 BIRC3Q13489 604 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 RUFY4Q6ZNE9 571 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 EFCAB13Q8IY85 973 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 RDH13Q8NBN7 331 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 BCAS4Q8TDM0 211 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 CBWD1Q9BRT8 395 aa9.99□□□□□ -0.81
CPNE4-210ENST00000512332 NTPCRQ9BSD7 190 aaKnown RBP9.99□□□□□ -0.81
CPNE4-210ENST00000512332 RAB17Q9H0T7 212 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms