RNA–Protein interactions for RNA: ENST00000512191.1

CAST-237, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-237ENST00000512191 DSC3Q14574 896 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 FSCN1Q16658 493 aaKnown RBP5.5□□□□□ -1.53
CAST-237ENST00000512191 IQSEC1Q6DN90 963 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 CCSAPQ6IQ19 270 aaPredicted RBP5.5□□□□□ -1.53
CAST-237ENST00000512191 ARMCX2Q7L311 632 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 FAM126BQ8IXS8 530 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 CCDC144CPQ8IYA2 1237 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 KBTBD3Q8NAB2 608 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 HERVK_113Q902F9 699 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 NECAB3Q96P71 396 aaPredicted RBP5.5□□□□□ -1.53
CAST-237ENST00000512191 ASB2Q96Q27 587 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 STRBPQ96SI9 672 aaKnown RBP5.5□□□□□ -1.53
CAST-237ENST00000512191 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.5□□□□□ -1.53
CAST-237ENST00000512191 PUS7LQ9H0K6 701 aaKnown RBP5.5□□□□□ -1.53
CAST-237ENST00000512191 HIPK3Q9H422 1215 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 IL23AQ9NPF7 189 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 MTMR4Q9NYA4 1195 aa5.5□□□□□ -1.53
CAST-237ENST00000512191 LAMA2P24043 3122 aaKnown RBP5.5□□□□□ -1.53
CAST-237ENST00000512191 PLXNA1Q9UIW2 1896 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 VCANP13611 3396 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 ZNFX1Q9P2E3 1918 aaKnown RBP5.49□□□□□ -1.53
CAST-237ENST00000512191 CYP2D7A0A087X1C5 515 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 GSG1L2A8MUP6 293 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 KIF28PB7ZC32 967 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 PATL2C9JE40 543 aaKnown RBP5.49□□□□□ -1.53
CAST-237ENST00000512191 TMEM232C9JQI7 657 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 FANCGO15287 622 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 RNF113AO15541 343 aaKnown RBP5.49□□□□□ -1.53
CAST-237ENST00000512191 GPAA1O43292 621 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 KPNA6O60684 536 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 LEFTY1O75610 366 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 RFC2P35250 354 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 CPT1AP50416 773 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 EPHB4P54760 987 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 ITGA7Q13683 1181 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 TMEM240Q5SV17 173 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 RASIP1Q5U651 963 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 SLFN13Q68D06 897 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 ALG1LQ6GMV1 187 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 RCSD1Q6JBY9 416 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 SLC23A3Q6PIS1 610 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 ZNF365Q70YC5 407 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 TLK2Q86UE8 772 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 STAG1Q8WVM7 1258 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 ASB11Q8WXH4 323 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 CEP95Q96GE4 821 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 NUP88Q99567 741 aaPredicted RBP5.49□□□□□ -1.53
CAST-237ENST00000512191 C1QTNF1Q9BXJ1 281 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 NAPBQ9H115 298 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 TNKS2Q9H2K2 1166 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 RAVER2Q9HCJ3 691 aaKnown RBP5.49□□□□□ -1.53
CAST-237ENST00000512191 VTA1Q9NP79 307 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 HOMER2Q9NSB8 354 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 CACNA2D2Q9NY47 1150 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 RIPK3Q9Y572 518 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 PCDHA11Q9Y5I1 949 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 SLC4A7Q9Y6M7 1214 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 CDH23Q9H251 3354 aa5.49□□□□□ -1.53
CAST-237ENST00000512191 TTC41PQ6P2S7 1318 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 PARP14Q460N5 1801 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 PLIN4Q96Q06 1357 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 IGKV6D-41A0A0C4DH26 115 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 TSPY2A6NKD2 308 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 NKRFO15226 690 aaKnown RBP eCLIP5.48□□□□□ -1.53
CAST-237ENST00000512191 PARNO95453 639 aaKnown RBP5.48□□□□□ -1.53
CAST-237ENST00000512191 CD4P01730 458 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 RNASE1P07998 156 aaKnown RBP5.48□□□□□ -1.53
CAST-237ENST00000512191 ATP2A2P16615 1042 aaKnown RBP5.48□□□□□ -1.53
CAST-237ENST00000512191 ITIH2P19823 946 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 NT5C2P49902 561 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 PKN1Q16512 942 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 LLGL2Q6P1M3 1020 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 CXCL17Q6UXB2 119 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 TICAM2Q86XR7 235 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 IFNL3Q8IZI9 196 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 FAM133AQ8N9E0 248 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 SLC43A3Q8NBI5 491 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 C3orf58Q8NDZ4 430 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 PHOSPHO2Q8TCD6 241 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 STK35Q8TDR2 534 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 TMEM40Q8WWA1 233 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 PPM1EQ8WY54 764 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 FAM168AQ92567 244 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 UHRF1Q96T88 793 aaPredicted RBP5.48□□□□□ -1.53
CAST-237ENST00000512191 MAF1Q9H063 256 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 PRDM12Q9H4Q4 367 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 A1CFQ9NQ94 594 aaKnown RBP5.48□□□□□ -1.53
CAST-237ENST00000512191 RNF146Q9NTX7 359 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 MBNL3Q9NUK0 354 aaKnown RBP5.48□□□□□ -1.53
CAST-237ENST00000512191 STX8Q9UNK0 236 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 COG5Q9UP83 839 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 SMCHD1A6NHR9 2005 aa5.48□□□□□ -1.53
CAST-237ENST00000512191 BAZ2AQ9UIF9 1905 aaKnown RBP5.48□□□□□ -1.53
CAST-237ENST00000512191 COL11A1P12107 1806 aaPredicted RBP5.48□□□□□ -1.53
CAST-237ENST00000512191 MYH7P12883 1935 aa5.47□□□□□ -1.53
CAST-237ENST00000512191 TTC28Q96AY4 2481 aa5.47□□□□□ -1.53
CAST-237ENST00000512191 MYADML2A6NDP7 307 aa5.47□□□□□ -1.53
CAST-237ENST00000512191 ICAM1P05362 532 aa5.47□□□□□ -1.53
CAST-237ENST00000512191 ACRP10323 421 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms