RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TM4SF4P48230 202 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 NLRP5P59047 1200 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 GBE1Q04446 702 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 CNGA3Q16281 694 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 INAQ16352 499 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCDC183Q5T5S1 534 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 RAB12Q6IQ22 244 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 DPP8Q6V1X1 898 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SYDE1Q6ZW31 735 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 ARMC9Q7Z3E5 817 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 NCAPG2Q86XI2 1143 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SPATS2Q86XZ4 545 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SULF1Q8IWU6 871 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 DDX60Q8IY21 1712 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZNF280CQ8ND82 737 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZNF296Q8WUU4 475 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SHC3Q92529 594 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 CENPIQ92674 756 aaPredicted RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 CLUHP3Q96NS8 147 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLF1Q9BQI6 1058 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 PUS3Q9BZE2 481 aaKnown RBP5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRPV4Q9HBA0 871 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 SENP2Q9HC62 589 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 ITM2CQ9NQX7 267 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 RNF181Q9P0P0 153 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 POLIQ9UNA4 740 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 EDARQ9UNE0 448 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 PCDHGC5Q9Y5F6 944 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 KIAA1551Q9HCM1 1747 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 CEP350Q5VT06 3117 aa5.5□□□□□ -1.53
TRAPPC11-208ENST00000511955 PNMA6EA0A0J9YXQ4 647 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 AP3B1O00203 1094 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 CACNB4O00305 520 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ERC2O15083 957 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 POLR3GO15318 223 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 GNAI2P04899 355 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PDHA1P08559 390 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 GNAI3P08754 354 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 CLTBP09497 229 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TOP1P11387 765 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 IMPDH2P12268 514 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 CCND1P24385 295 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ATP5OP48047 213 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SMTNP53814 917 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 NUCB2P80303 420 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRAF1Q13077 416 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 MVPQ14764 893 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 GNPTABQ3T906 1256 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 LRRC24Q50LG9 513 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 IFFO2Q5TF58 517 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 FBXW10Q5XX13 1052 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 MCTP2Q6DN12 878 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLC7A5P1Q8MH63 180 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 NUP93Q8N1F7 819 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 LINC00469Q8N7U9 141 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ANKRD44Q8N8A2 993 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ANKRD52Q8NB46 1076 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 OR52K2Q8NGK3 314 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 EPSTI1Q96J88 318 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 CRAMP1Q96RY5 1269 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PIGSQ96S52 555 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 CRBNQ96SW2 442 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TACO1Q9BSH4 297 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PUS7LQ9H0K6 701 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TNMDQ9H2S6 317 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SMOC1Q9H4F8 434 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 AGO4Q9HCK5 861 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ABCB6Q9NP58 842 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZC3H7BQ9UGR2 993 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 COG5Q9UP83 839 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 CACNA1FO60840 1977 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 KIF13BQ9NQT8 1826 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 A8MVJ9 347 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PHF20L1A8MW92 1017 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 H0Y626 953 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 H7C0S8 307 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TPP1O14773 563 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 NDC80O14777 642 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SLC7A4O43246 635 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 STX6O43752 255 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 MAFO75444 373 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 UFL1O94874 794 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ADCY5O95622 1261 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 CSF1RP07333 972 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TMEM11P17152 192 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 RHCEP18577 417 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 TRIM21P19474 475 aaKnown RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SDSP20132 328 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 IRS1P35568 1242 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ID4P47928 161 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SULT1E1P49888 294 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 CLCN2P51788 898 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PRELPP51888 382 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 RHDQ02161 417 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 PPARDQ03181 441 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ZBTB16Q05516 673 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 ITIH3Q06033 890 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 BNIP1Q12981 228 aa5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 NMIQ13287 307 aaPredicted RBP5.49□□□□□ -1.53
TRAPPC11-208ENST00000511955 SGCGQ13326 291 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms