RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 COL1A2P08123 1366 aa10.02□□□□□ -0.8
NR1I3-228ENST00000511676 A0A1B0GTH6 734 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 AP5Z1O43299 807 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 EFCAB14O75071 495 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 PPFIA4O75335 1185 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 PPP1R37O75864 691 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 SNAI1O95863 264 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 SERPINC1P01008 464 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 TPM2P07951 284 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 RPL13P26373 211 aaKnown RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 SMTNP53814 917 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 NCKAP1LP55160 1127 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 GSDMDP57764 484 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 ARHGAP1Q07960 439 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 BFSP2Q13515 415 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 ITGA7Q13683 1181 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 PPP2R5AQ15172 486 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 TARBP2Q15633 366 aaKnown RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 FSCN1Q16658 493 aaKnown RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 KNOP1Q1ED39 458 aaKnown RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 FILIP1LQ4L180 1135 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 TCP11X2Q5H9J9 407 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 ODR4Q5SWX8 454 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 C9orf50Q5SZB4 431 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 ZNF720Q7Z2F6 126 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 FAM178BQ8IXR5 827 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 DAW1Q8N136 415 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 ATP8B4Q8TF62 1192 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 SCFD1Q8WVM8 642 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 SLC7A3Q8WY07 619 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 MYLIPQ8WY64 445 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 TRIM44Q96DX7 344 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 CEP170P1Q96L14 293 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 FIZ1Q96SL8 496 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 KCTD10Q9H3F6 313 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 HIPK3Q9H422 1215 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 TMEM206Q9H813 350 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 MRPL44Q9H9J2 332 aaKnown RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 ATP6V0A4Q9HBG4 840 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 TYW1Q9NV66 732 aaKnown RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 THEGQ9P2T0 379 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 MAGEC2Q9UBF1 373 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 TBX21Q9UL17 535 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 ZNF215Q9UL58 517 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-228ENST00000511676 PCDHB8Q9UN66 801 aa10.02□□□□□ -0.81
NR1I3-228ENST00000511676 CUL9Q8IWT3 2517 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 STK25O00506 426 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 SLC16A3O15427 465 aaKnown RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 CALUO43852 315 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 HBP1O60381 514 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 USO1O60763 962 aaKnown RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 HIP1RO75146 1068 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 ARIH2O95376 493 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 UBASH3AP57075 661 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 ENPEPQ07075 957 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 DMP1Q13316 513 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 LY6KQ17RY6 165 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 HSDL1Q3SXM5 330 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 TMEM240Q5SV17 173 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 ANKRD40Q6AI12 368 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 CCSAPQ6IQ19 270 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 LRRC55Q6ZSA7 311 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 HS2ST1Q7LGA3 356 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 FILIP1Q7Z7B0 1213 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 SLC9A9Q8IVB4 645 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 C12orf56Q8IXR9 622 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 MYCT1Q8N699 235 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 PCYT2Q99447 389 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 DUSP9Q99956 384 aaKnown RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 MKNK1Q9BUB5 465 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 SAMSN1Q9NSI8 373 aaKnown RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 ERAP1Q9NZ08 941 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 SEPT9Q9UHD8 586 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 COG5Q9UP83 839 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
NR1I3-228ENST00000511676 PCDHA11Q9Y5I1 949 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 ITIH6Q6UXX5 1313 aa10.01□□□□□ -0.81
NR1I3-228ENST00000511676 ZNFX1Q9P2E3 1918 aaKnown RBP10□□□□□ -0.81
NR1I3-228ENST00000511676 NPHP3-ACAD11A0A0J9YXS1 232 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 A0A1W2PQC6 194 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 KCNJ18B7U540 433 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 ZBTB39O15060 712 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 MAPK13O15264 365 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 DYNC1LI2O43237 492 aaPredicted RBP10□□□□□ -0.81
NR1I3-228ENST00000511676 GCNT3O95395 438 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 ATP1A3P13637 1013 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 ATP4AP20648 1035 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 NAMPTP43490 491 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 GTF2BQ00403 316 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 POU5F1BQ06416 359 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 TRIM14Q14142 442 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 KCNJ12Q14500 433 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 ZNF484Q5JVG2 852 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 UTP14CQ5TAP6 766 aaKnown RBP10□□□□□ -0.81
NR1I3-228ENST00000511676 APTXQ7Z2E3 356 aaKnown RBP10□□□□□ -0.81
NR1I3-228ENST00000511676 TLK2Q86UE8 772 aa10□□□□□ -0.81
NR1I3-228ENST00000511676 FAM126BQ8IXS8 530 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms