RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 TAF1CQ15572 869 aaPredicted RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 PDIK1LQ8N165 341 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 FAM151AQ8WW52 585 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 CHMP6Q96FZ7 201 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 TTC1Q99614 292 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 KIF2CQ99661 725 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 NOVA2Q9UNW9 492 aaKnown RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 TTC26A0AVF1 554 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 ZRANB2O95218 330 aaKnown RBP eCLIP9.68□□□□□ -0.86
NEK1-207ENST00000511633 PSMC1P62191 440 aaKnown RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 IRX4P78413 519 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 AFG1LQ8WV93 481 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 RBM41Q96IZ5 413 aaKnown RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 NUDCD1Q96RS6 583 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 DIP2BQ9P265 1576 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 A8MXQ7 604 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 STXBP3O00186 592 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 FTLP02792 175 aaPredicted RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 PMLP29590 882 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 ZNF157P51786 506 aaPredicted RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 PDIA5Q14554 519 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 CCDC144BQ3MJ40 725 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 BZW1Q7L1Q6 419 aaKnown RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 GANCQ8TET4 914 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 ABCB6Q9NP58 842 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 KLHL8Q9P2G9 620 aaPredicted RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 SUCLA2Q9P2R7 463 aaPredicted RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 STRIP2Q9ULQ0 834 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 SLC8A2Q9UPR5 921 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 SNX24Q9Y343 169 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 TAF6LQ9Y6J9 622 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 C19orf81C9J6K1 198 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 GOLGA8MH3BSY2 632 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 PRKCBP05771 671 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 SOX5P35711 763 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 CLNS1AP54105 237 aaKnown RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 MUM1Q2TAK8 710 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.68□□□□□ -0.86
NEK1-207ENST00000511633 RBM46Q8TBY0 533 aaKnown RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 RAET1EQ8TD07 263 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 NCAPGQ9BPX3 1015 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 VCPKMTQ9H867 229 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 SAYSD1Q9NPB0 183 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
NEK1-207ENST00000511633 FRMPD1Q5SYB0 1578 aa9.68□□□□□ -0.86
NEK1-207ENST00000511633 SPDYE2BA6NHP3 402 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 SPDYE6P0CI01 402 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 LIG3P49916 1009 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 NME3Q13232 169 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 SNAPC2Q13487 334 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 MAP3K21Q5TCX8 1036 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 CCDC197Q8NCU1 140 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 WHAMMQ8TF30 809 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 KLC2Q9H0B6 622 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 LMCD1Q9NZU5 365 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 PIN4Q9Y237 131 aaKnown RBP9.67□□□□□ -0.86
NEK1-207ENST00000511633 CEMIPQ8WUJ3 1361 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 CTNND1O60716 968 aaKnown RBP9.67□□□□□ -0.86
NEK1-207ENST00000511633 CLTAP09496 248 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 SDC4P31431 198 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 GLYCTKQ8IVS8 523 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 EXT2Q93063 718 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 SYNGAP1Q96PV0 1343 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 SERPINB6P35237 376 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 CLCN6P51797 869 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 STX1BP61266 288 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 SLC15A2Q16348 729 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 CCDC38Q502W7 563 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 KCNV1Q6PIU1 500 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 PACSIN2Q9UNF0 486 aaPredicted RBP9.67□□□□□ -0.86
NEK1-207ENST00000511633 CEP170BQ9Y4F5 1589 aaPredicted RBP9.67□□□□□ -0.86
NEK1-207ENST00000511633 MIF4GDA9UHW6 222 aaKnown RBP9.67□□□□□ -0.86
NEK1-207ENST00000511633 DYNC1LI2O43237 492 aaPredicted RBP9.67□□□□□ -0.86
NEK1-207ENST00000511633 IFT88Q13099 833 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 DBN1Q16643 649 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 NFRKBQ6P4R8 1299 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 ZNF449Q6P9G9 518 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 ELMOD1Q8N336 334 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 REEP2Q9BRK0 252 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 TRIM9Q9C026 710 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 DEFB129Q9H1M3 183 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 JMJD4Q9H9V9 463 aa9.67□□□□□ -0.86
NEK1-207ENST00000511633 DIS3Q9Y2L1 958 aaKnown RBP9.67□□□□□ -0.86
NEK1-207ENST00000511633 RIMS1Q86UR5 1692 aaKnown RBP9.67□□□□□ -0.86
NEK1-207ENST00000511633 NR3C2P08235 984 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 CUL1Q13616 776 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 TRIM42Q8IWZ5 723 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 FBXL13Q8NEE6 735 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 PDCD6IPQ8WUM4 868 aaKnown RBP9.66□□□□□ -0.86
NEK1-207ENST00000511633 AGBL1Q96MI9 1066 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 IL25Q9H293 177 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 G3BP2Q9UN86 482 aaKnown RBP9.66□□□□□ -0.86
NEK1-207ENST00000511633 A0A1B0GUA9 196 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 MOCS2O96007 188 aaPredicted RBP9.66□□□□□ -0.86
NEK1-207ENST00000511633 DUOXA2Q1HG44 320 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 TMTC4Q5T4D3 741 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 ELMSAN1Q6PJG2 1045 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 TTC7AQ9ULT0 858 aaPredicted RBP9.66□□□□□ -0.86
NEK1-207ENST00000511633 PIK3R2O00459 728 aa9.66□□□□□ -0.86
NEK1-207ENST00000511633 CTSHP09668 335 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms