RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 H3BRB1 525 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 P4HA2O15460 535 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 ADCY3O60266 1144 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 KRT13P13646 458 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 AKR1A1P14550 325 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 MARK3P27448 753 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 CNGA1P29973 690 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 CASP14P31944 242 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 PSMC4P43686 418 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 KCNH2Q12809 1159 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 MFSD14CQ5VZR4 134 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 CDCA2Q69YH5 1023 aaPredicted RBP16.63■□□□□ 0.25
SCLT1-209ENST00000511426 SLFN12LQ6IEE8 588 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 ZBTB8OSQ8IWT0 167 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 ZIC5Q96T25 663 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 TUT1Q9H6E5 874 aaKnown RBP16.63■□□□□ 0.25
SCLT1-209ENST00000511426 SPTLC3Q9NUV7 552 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 ADGRA3Q8IWK6 1321 aa16.63■□□□□ 0.25
SCLT1-209ENST00000511426 K7ERI5 159 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 N4BP1O75113 896 aaKnown RBP16.62■□□□□ 0.25
SCLT1-209ENST00000511426 F2P00734 622 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 GNRH1P01148 92 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 TMOD1P28289 359 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 ZBED6P86452 979 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 BFSP1Q12934 665 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 TMEM63BQ5T3F8 832 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 ZPBP2Q6X784 338 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 TLK2Q86UE8 772 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 TMTC1Q8IUR5 882 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 OR8K1Q8NGG5 319 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 ASAP3Q8TDY4 903 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 SLC35C1Q96A29 364 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 TMEM143Q96AN5 459 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 FBXL18Q96ME1 805 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 DNAJC7Q99615 494 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 KATNAL1Q9BW62 490 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 ABHD10Q9NUJ1 306 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 HSPBP1Q9NZL4 362 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 FLRT1Q9NZU1 646 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 PYCARDQ9ULZ3 195 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 STYXL1Q9Y6J8 313 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 LRRIQ4A6NIV6 560 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 HNRNPDLO14979 420 aaKnown RBP16.62■□□□□ 0.25
SCLT1-209ENST00000511426 PMM2O15305 246 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 KPNA6O60684 536 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 C22orf31O95567 290 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 HOXD10P28358 340 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 KRT9P35527 623 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
SCLT1-209ENST00000511426 CDC42EP1Q00587 391 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 SP3Q02447 781 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 CAPSQ13938 189 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 KSR1Q8IVT5 923 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 PCMTD1Q96MG8 357 aaPredicted RBP16.62■□□□□ 0.25
SCLT1-209ENST00000511426 AP5M1Q9H0R1 490 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 PLCB1Q9NQ66 1216 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 FBXL5Q9UKA1 691 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 MGAMO43451 1857 aa16.62■□□□□ 0.25
SCLT1-209ENST00000511426 CASP8AP2Q9UKL3 1982 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 TTC26A0AVF1 554 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 DUSP11O75319 330 aaKnown RBP16.61■□□□□ 0.25
SCLT1-209ENST00000511426 LDHAP00338 332 aaKnown RBP16.61■□□□□ 0.25
SCLT1-209ENST00000511426 INSRRP14616 1297 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 CYP2C19P33261 490 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 CASP4P49662 377 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 CYP2J2P51589 502 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 ADKP55263 362 aaKnown RBP16.61■□□□□ 0.25
SCLT1-209ENST00000511426 NKX3-2P78367 333 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 CDK17Q00537 523 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 GRM1Q13255 1194 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 NOLC1Q14978 699 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCLT1-209ENST00000511426 GJC2Q5T442 439 aaPredicted RBP16.61■□□□□ 0.25
SCLT1-209ENST00000511426 IFNLR1Q8IU57 520 aaPredicted RBP16.61■□□□□ 0.25
SCLT1-209ENST00000511426 TMEM139Q8IV31 216 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 ZNF710Q8N1W2 664 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 NEK11Q8NG66 645 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 RNPEPQ9H4A4 650 aa16.61■□□□□ 0.25
SCLT1-209ENST00000511426 SIP14410 1827 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 HNRNPH3P31942 346 aaKnown RBP16.6■□□□□ 0.25
SCLT1-209ENST00000511426 LIG4P49917 911 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 SOX10P56693 466 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 LAMTOR4Q0VGL1 99 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 CETN1Q12798 172 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 CCL14Q16627 93 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 FMNL3Q8IVF7 1028 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 LINC01465Q8N7H1 131 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 PRPF31Q8WWY3 499 aaKnown RBP16.6■□□□□ 0.25
SCLT1-209ENST00000511426 CBWD1Q9BRT8 395 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 KIFC3Q9BVG8 833 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 ZNHIT6Q9NWK9 470 aaKnown RBP16.6■□□□□ 0.25
SCLT1-209ENST00000511426 CEP72Q9P209 647 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 SUCLA2Q9P2R7 463 aaPredicted RBP16.6■□□□□ 0.25
SCLT1-209ENST00000511426 MYO6Q9UM54 1294 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 NRCAMQ92823 1304 aa16.6■□□□□ 0.25
SCLT1-209ENST00000511426 GOLGA6L9A6NEM1 432 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 DYNC1LI2O43237 492 aaPredicted RBP16.59■□□□□ 0.25
SCLT1-209ENST00000511426 RFX1P22670 979 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 CTGFP29279 349 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 ARHGEF6Q15052 776 aa16.59■□□□□ 0.25
SCLT1-209ENST00000511426 MEA1Q16626 185 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms