RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	CSPP1	Q1MSJ5	1256 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	TTC38	Q5R3I4	469 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	TWF2	Q6IBS0	349 aa	Known RBP	13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	KCNT2	Q6UVM3	1135 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	NOSTRIN	Q8IVI9	506 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	FAM178B	Q8IXR5	827 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	LRRC43	Q8N309	656 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	C4orf32	Q8N8J7	132 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	FAM184A	Q8NB25	1140 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	RNF149	Q8NC42	400 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	ASAP3	Q8TDY4	903 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	PIGO	Q8TEQ8	1089 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	LPP	Q93052	612 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	LRFN3	Q9BTN0	628 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	IGFLR1	Q9H665	355 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	FAM105A	Q9NUU6	356 aa		13.43	□□□□□ -0.26
CHFR-208	ENST00000511001	DGAT1	O75907	488 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	OR52Z1	P0C646	297 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	U2AF2	P26368	475 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	HOXA11	P31270	313 aa	Predicted RBP	13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	ARL2	P36404	184 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	PBX3	P40426	434 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	TEC	P42680	631 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	TRAPPC10	P48553	1259 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	TOB1	P50616	345 aa	Predicted RBP	13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	PTEN	P60484	403 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	ORC2	Q13416	577 aa	Predicted RBP	13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	NBR1	Q14596	966 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	UBXN11	Q5T124	520 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	EP400NL	Q6ZTU2	488 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	CATSPER3	Q86XQ3	398 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	THNSL1	Q8IYQ7	743 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	ABI1	Q8IZP0	508 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	MRPS27	Q92552	414 aa	Known RBP	13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	TUFT1	Q9NNX1	390 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	TLR9	Q9NR96	1032 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	LZTS1	Q9Y250	596 aa		13.42	□□□□□ -0.26
CHFR-208	ENST00000511001	PIEZO1	Q92508	2521 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	GLP2R	O95838	553 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	SKI	P12755	728 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	XRCC6	P12956	609 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	GLRA2	P23416	452 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	NRIP1	P48552	1158 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	CAPS	Q13938	189 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	PUS10	Q3MIT2	529 aa	Known RBP	13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	LONRF3	Q496Y0	759 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	AGMO	Q6ZNB7	445 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	MRPL10	Q7Z7H8	261 aa	Known RBP	13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	SLC39A11	Q8N1S5	342 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	EFHB	Q8N7U6	833 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	TMX3	Q96JJ7	454 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	MSLNL	Q96KJ4	702 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	ZNF558	Q96NG5	402 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	CLEC1B	Q9P126	229 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	TRIP11	Q15643	1979 aa		13.41	□□□□□ -0.26
CHFR-208	ENST00000511001	MBTPS2	O43462	519 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	ST18	O60284	1047 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	B4GALT3	O60512	393 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	USO1	O60763	962 aa	Known RBP	13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	OFD1	O75665	1012 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	RPA1	P27694	616 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	RAB27A	P51159	221 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	POU5F1B	Q06416	359 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	MXD4	Q14582	209 aa	Predicted RBP	13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	CLUL1	Q15846	466 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	ECM1	Q16610	540 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	AMHR2	Q16671	573 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	DUSP6	Q16828	381 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	POTEG	Q6S5H5	508 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	RBM23	Q86U06	439 aa	Known RBP	13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	PPP2R3C	Q969Q6	453 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	TBC1D32	Q96NH3	1257 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	MRPL9	Q9BYD2	267 aa	Known RBP	13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	NRDE2	Q9H7Z3	1164 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	SPG21	Q9NZD8	308 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	DBR1	Q9UK59	544 aa	Known RBP	13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	PCDHB2	Q9Y5E7	798 aa		13.4	□□□□□ -0.26
CHFR-208	ENST00000511001	MYH11	P35749	1972 aa		13.4	□□□□□ -0.27
CHFR-208	ENST00000511001	FAM86C2P	A6NEL3	165 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	NT5C1B-RDH14	C9J2C7	533 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	PER2	O15055	1255 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	TSPAN1	O60635	241 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	PPM1A	P35813	382 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	FXR2	P51116	673 aa	Known RBP eCLIP	13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	AFF1	P51825	1210 aa	Known RBP	13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	BCAR1	P56945	870 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	RBM10	P98175	930 aa	Known RBP	13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	MBTD1	Q05BQ5	628 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	KCNC3	Q14003	757 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	NOMO2	Q5JPE7	1267 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	TMEM31	Q5JXX7	168 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	PLPP4	Q5VZY2	271 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	PDE12	Q6L8Q7	609 aa	Known RBP	13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	TMEM173	Q86WV6	379 aa	Predicted RBP	13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	SMG8	Q8ND04	991 aa	Known RBP	13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	VN1R2	Q8NFZ6	395 aa		13.39	□□□□□ -0.27
CHFR-208	ENST00000511001	MICAL1	Q8TDZ2	1067 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms