RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 FAM167AQ96KS9 214 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 FAM161BQ96MY7 647 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 YIPF3Q9GZM5 350 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 ING2Q9H160 280 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 CPVLQ9H3G5 476 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 WARS2Q9UGM6 360 aaKnown RBP11.28□□□□□ -0.6
NEK1-206ENST00000510533 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 MAPK6Q16659 721 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 PDXDC1Q6P996 788 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 ANGPTL8Q6UXH0 198 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 FRA10AC1Q70Z53 315 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 CATSPER4Q7RTX7 472 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 FSD1LQ9BXM9 530 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 GCOM2Q9BZD3 368 aaPredicted RBP11.28□□□□□ -0.6
NEK1-206ENST00000510533 SEL1LQ9UBV2 794 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 ZDHHC9Q9Y397 364 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 PFASO15067 1338 aa11.28□□□□□ -0.6
NEK1-206ENST00000510533 SNX2O60749 519 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 KRT7P08729 469 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 DHX34Q14147 1143 aaKnown RBP11.27□□□□□ -0.6
NEK1-206ENST00000510533 LRRC14Q15048 493 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 NAALADL2Q58DX5 795 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 EP400NLQ6ZTU2 488 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 KRT27Q7Z3Y8 459 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 ZBED8Q8IZ13 594 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 RNF217Q8TC41 542 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 RUBCNQ92622 972 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 GRAMD1AQ96CP6 724 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 TMEM260Q9NX78 707 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 NMT2O60551 498 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 ASNSP08243 561 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 ALX1Q15699 326 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 GRAMD4Q6IC98 578 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 RHOT1Q8IXI2 618 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 ATP11CQ8NB49 1132 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 RFFLQ8WZ73 363 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 ALKBH8Q96BT7 664 aaKnown RBP11.27□□□□□ -0.6
NEK1-206ENST00000510533 NDE1Q9NXR1 346 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 BARHL2Q9NY43 387 aa11.27□□□□□ -0.6
NEK1-206ENST00000510533 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.27□□□□□ -0.61
NEK1-206ENST00000510533 CREB3O43889 395 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 DIAPH2O60879 1101 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 SDC4P31431 198 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 NSUN2Q08J23 767 aaKnown RBP eCLIP11.27□□□□□ -0.61
NEK1-206ENST00000510533 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
NEK1-206ENST00000510533 ZNF746Q6NUN9 644 aaPredicted RBP11.27□□□□□ -0.61
NEK1-206ENST00000510533 SPATA4Q8NEY3 305 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 GPR101Q96P66 508 aaPredicted RBP11.27□□□□□ -0.61
NEK1-206ENST00000510533 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 DENND3A2RUS2 1198 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 SYCE1LA8MT33 242 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 PRDX5P30044 214 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 KRT76Q01546 638 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 ANO5Q75V66 913 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 NUDCD3Q8IVD9 361 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 RMDN3Q96TC7 470 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 DDX56Q9NY93 547 aaKnown RBP11.27□□□□□ -0.61
NEK1-206ENST00000510533 SNX5Q9Y5X3 404 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 USP17L10C9JJH3 530 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 GNA15P30679 374 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 CLEC4GQ6UXB4 293 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 CCNYL1Q8N7R7 359 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 WDR24Q96S15 920 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 DCP1AQ9NPI6 582 aaPredicted RBP11.27□□□□□ -0.61
NEK1-206ENST00000510533 SRP68Q9UHB9 627 aaKnown RBP11.27□□□□□ -0.61
NEK1-206ENST00000510533 PCSK1NQ9UHG2 260 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 SLC4A7Q9Y6M7 1214 aa11.27□□□□□ -0.61
NEK1-206ENST00000510533 NCAPD2Q15021 1401 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 POTEFA5A3E0 1075 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 PP2D1A8MPX8 630 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 POTEIP0CG38 1075 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 GPC3P51654 580 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 KCNQ4P56696 695 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 HLFQ16534 295 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 IZUMO3Q5VZ72 239 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 NDUFAF2Q8N183 169 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 PRPF38AQ8NAV1 312 aaKnown RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 TTC8Q8TAM2 541 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 FAM167BQ9BTA0 163 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 FAM49AQ9H0Q0 323 aaPredicted RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 SLC8A2Q9UPR5 921 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 PRR36Q9H6K5 1346 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 RNF103-CHMP3A0A140T963 221 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 TMEM247A6NEH6 219 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 KIF28PB7ZC32 967 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 FOXN1O15353 648 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 NPR1P16066 1061 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 VSNL1P62760 191 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 ATP2C1P98194 919 aaPredicted RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 GPR162Q16538 588 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 ZNF568Q3ZCX4 644 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 C16orf87Q6PH81 154 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 GLYCTKQ8IVS8 523 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 TOPORSQ9NS56 1045 aaPredicted RBP11.26□□□□□ -0.61
NEK1-206ENST00000510533 UTYO14607 1347 aa11.26□□□□□ -0.61
NEK1-206ENST00000510533 MAGI3Q5TCQ9 1506 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms