RNA–Protein interactions for RNA: ENST00000510187.5

SQSTM1-213, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-213ENST00000510187 RNF40O75150 1001 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 CLSTN1O94985 981 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 IVLP07476 585 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 TGFB3P10600 412 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 CYP2B6P20813 491 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 C1QTNF8P60827 252 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 SP2Q02086 613 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 GFPT1Q06210 699 aaPredicted RBP17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 KIF22Q14807 665 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 CCDC181Q5TID7 509 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 EIF2AK1Q9BQI3 630 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 TINF2Q9BSI4 451 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 SAMM50Q9Y512 469 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 LRRC37A2A6NM11 1700 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 THSD7BQ9C0I4 1608 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 NFASCO94856 1347 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 SYNGAP1Q96PV0 1343 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 BTNL10A8MVZ5 291 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 MED24O75448 989 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 PRPF6O94906 941 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 SYF2O95926 243 aaKnown RBP17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 KRT76Q01546 638 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 SLC18A3Q16572 532 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 C10orf76Q5T2E6 689 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 KCNV1Q6PIU1 500 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 MIER3Q7Z3K6 550 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 FRMD5Q7Z6J6 570 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 APBA2Q99767 749 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 SENP7Q9BQF6 1050 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 JPH1Q9HDC5 661 aaPredicted RBP17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 TRAF3IP3Q9Y228 551 aa17.5■□□□□ 0.39
SQSTM1-213ENST00000510187 SORBS3O60504 671 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 SNAI1O95863 264 aaPredicted RBP17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 KRT18P05783 430 aaKnown RBP17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 CAPN2P17655 700 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 UBA1P22314 1058 aaKnown RBP17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 ANXA13P27216 316 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 RPA1P27694 616 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 POLR2FP61218 127 aaKnown RBP17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 CYP4A11Q02928 519 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 EPHA7Q15375 998 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 NAB2Q15742 525 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 KLHDC7AQ5VTJ3 777 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 NFRKBQ6P4R8 1299 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 CATSPER3Q86XQ3 398 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 SYT2Q8N9I0 419 aaPredicted RBP17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 TLR10Q9BXR5 811 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 FGFBP2Q9BYJ0 223 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 GANQ9H2C0 597 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 BCAS3Q9H6U6 928 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 VTA1Q9NP79 307 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 PLCB1Q9NQ66 1216 aa17.49■□□□□ 0.39
SQSTM1-213ENST00000510187 DOCK3Q8IZD9 2030 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 KIAA1217Q5T5P2 1943 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 GRID2IPA4D2P6 1211 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 ARIH2O95376 493 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 CCNE2O96020 404 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 SPATA31C1P0DKV0 1188 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 SP4Q02446 784 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 ADAM9Q13443 819 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 NEDD9Q14511 834 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 ASIC2Q16515 512 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 LY6KQ17RY6 165 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 BMT2Q1RMZ1 405 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 CFAP221Q4G0U5 840 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 ARSHQ5FYA8 562 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 ZNF746Q6NUN9 644 aaPredicted RBP17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 EMBQ6PCB8 327 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 CYFIP1Q7L576 1253 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 EPM2AIP1Q7L775 607 aaPredicted RBP17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 NELFCDQ8IXH7 590 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 AFAP1L1Q8TED9 768 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 SCFD2Q8WU76 684 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 HSD17B14Q9BPX1 270 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 POLR3CQ9BUI4 534 aaPredicted RBP17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 FAM204AQ9H8W3 233 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 NLRC4Q9NPP4 1024 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 PDGFCQ9NRA1 345 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 RGL1Q9NZL6 768 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 FLRT1Q9NZU1 646 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 SLC9A2Q9UBY0 812 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 SALL4Q9UJQ4 1053 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 DNM3Q9UQ16 869 aa17.48■□□□□ 0.39
SQSTM1-213ENST00000510187 MCM3APO60318 1980 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 WDR64B1ANS9 1081 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 GPR25O00155 361 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 TULP2O00295 520 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 MYBL2P10244 700 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 SFNP31947 248 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 JAK3P52333 1124 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 EPHB4P54760 987 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 NNTQ13423 1086 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 TTLL4Q14679 1199 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 CCL14Q16627 93 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 DYDC2Q96IM9 177 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 DRC1Q96MC2 740 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 ABHD16BQ9H3Z7 469 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
SQSTM1-213ENST00000510187 TBC1D7Q9P0N9 293 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms