RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 OTOP3Q7RTS5 596 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 CATSPER4Q7RTX7 472 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 GPR149Q86SP6 731 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 ZNF410Q86VK4 478 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 RHPN2Q8IUC4 686 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 FLCNQ8NFG4 579 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 TBCKQ8TEA7 893 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 BCL7CQ8WUZ0 217 aaPredicted RBP11.7□□□□□ -0.54
DDX41-211ENST00000510171 GJA10Q969M2 543 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 JAKMIP1Q96N16 626 aaKnown RBP11.7□□□□□ -0.54
DDX41-211ENST00000510171 CEP89Q96ST8 783 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 SH2D3AQ9BRG2 576 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 RNF26Q9BY78 433 aaPredicted RBP11.7□□□□□ -0.54
DDX41-211ENST00000510171 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 SH3GLB2Q9NR46 395 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 VPS54Q9P1Q0 977 aa11.7□□□□□ -0.54
DDX41-211ENST00000510171 PIN4Q9Y237 131 aaKnown RBP11.7□□□□□ -0.54
DDX41-211ENST00000510171 CYP3A7-CYP3A51PA0A087WV96 503 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 TMEM150BA6NC51 233 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 PRR23AA6NEV1 266 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 MEIS3P2A8K0S8 358 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 IFNAR1P17181 557 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 CYP3A7P24462 503 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 SLC11A1P49279 550 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 RAB27AP51159 221 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 TDGQ13569 410 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 PTPN14Q15678 1187 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 NTRK3Q16288 839 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 CCDC149Q6ZUS6 474 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 SKAP1Q86WV1 359 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 KSR1Q8IVT5 923 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 FBXL16Q8N461 479 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 KCNB2Q92953 911 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 NLRP4Q96MN2 994 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 KLHL5Q96PQ7 755 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 FAM193BQ96PV7 902 aaPredicted RBP11.69□□□□□ -0.54
DDX41-211ENST00000510171 JPH2Q9BR39 696 aaPredicted RBP11.69□□□□□ -0.54
DDX41-211ENST00000510171 SFXN1Q9H9B4 322 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 KANSL3Q9P2N6 904 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 DNAJB4Q9UDY4 337 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 PCDHB2Q9Y5E7 798 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 KIAA1671Q9BY89 1806 aa11.69□□□□□ -0.54
DDX41-211ENST00000510171 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
DDX41-211ENST00000510171 ZDBF2Q9HCK1 2354 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 MAFO75444 373 aaPredicted RBP11.68□□□□□ -0.54
DDX41-211ENST00000510171 CNPP09543 421 aaKnown RBP11.68□□□□□ -0.54
DDX41-211ENST00000510171 CLCN4P51793 760 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 PSMC5P62195 406 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 B3GNT9Q6UX72 402 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 AGMOQ6ZNB7 445 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 FRMD5Q7Z6J6 570 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 ZNF280BQ86YH2 543 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 NKD2Q969F2 451 aaPredicted RBP11.68□□□□□ -0.54
DDX41-211ENST00000510171 VN1R3Q9BXE9 311 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 KCNK12Q9HB15 430 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 MRPL17Q9NRX2 175 aaKnown RBP11.68□□□□□ -0.54
DDX41-211ENST00000510171 FBXL21Q9UKT6 434 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 PCDHA4Q9UN74 947 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 FAN1Q9Y2M0 1017 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 TRIOO75962 3097 aa11.68□□□□□ -0.54
DDX41-211ENST00000510171 NID2Q14112 1375 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 PI15O43692 258 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 LILRB3O75022 631 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 DDHD2O94830 711 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 TDP2O95551 362 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 SSBP05455 408 aaKnown RBP eCLIP11.67□□□□□ -0.54
DDX41-211ENST00000510171 NPR3P17342 541 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 RPS6KB1P23443 525 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 PDIA3P30101 505 aaKnown RBP11.67□□□□□ -0.54
DDX41-211ENST00000510171 CCT2P78371 535 aaKnown RBP11.67□□□□□ -0.54
DDX41-211ENST00000510171 LETM2Q2VYF4 491 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 C15orf39Q6ZRI6 1047 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 ANO5Q75V66 913 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 MRPL10Q7Z7H8 261 aaKnown RBP11.67□□□□□ -0.54
DDX41-211ENST00000510171 EXOC8Q8IYI6 725 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 TRIM22Q8IYM9 498 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 FEZF2Q8TBJ5 459 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 SLC7A3Q8WY07 619 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 TMEM175Q9BSA9 504 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 AGXT2Q9BYV1 514 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 IFT122Q9HBG6 1241 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 AGPAT5Q9NUQ2 364 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 IGSF9Q9P2J2 1179 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 DUSP12Q9UNI6 340 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 SNX14Q9Y5W7 946 aa11.67□□□□□ -0.54
DDX41-211ENST00000510171 STK25O00506 426 aa11.66□□□□□ -0.54
DDX41-211ENST00000510171 NRP1O14786 923 aa11.66□□□□□ -0.54
DDX41-211ENST00000510171 B4GALT3O60512 393 aa11.66□□□□□ -0.54
DDX41-211ENST00000510171 DKC1O60832 514 aaKnown RBP eCLIP11.66□□□□□ -0.54
DDX41-211ENST00000510171 SRGAP2CP0DJJ0 459 aa11.66□□□□□ -0.54
DDX41-211ENST00000510171 AOC1P19801 751 aa11.66□□□□□ -0.54
DDX41-211ENST00000510171 PSMA5P28066 241 aa11.66□□□□□ -0.54
DDX41-211ENST00000510171 HSPA4P34932 840 aa11.66□□□□□ -0.54
DDX41-211ENST00000510171 QARSP47897 775 aaKnown RBP11.66□□□□□ -0.54
DDX41-211ENST00000510171 AFF1P51825 1210 aaKnown RBP11.66□□□□□ -0.54
DDX41-211ENST00000510171 SSRP1Q08945 709 aaKnown RBP11.66□□□□□ -0.54
DDX41-211ENST00000510171 PLA2G4FQ68DD2 849 aa11.66□□□□□ -0.54
DDX41-211ENST00000510171 CWF19L1Q69YN2 538 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms