RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 AFF1P51825 1210 aaKnown RBP15.06■□□□□ 0
SNF8-206ENST00000509989 CACNB1Q02641 598 aaPredicted RBP15.06■□□□□ 0
SNF8-206ENST00000509989 RAD51AP2Q09MP3 1159 aa15.06■□□□□ 0
SNF8-206ENST00000509989 MAPK7Q13164 816 aa15.06■□□□□ 0
SNF8-206ENST00000509989 TMEM119Q4V9L6 283 aa15.06■□□□□ 0
SNF8-206ENST00000509989 HYIQ5T013 277 aa15.06■□□□□ 0
SNF8-206ENST00000509989 ARL6IP4Q66PJ3 421 aaKnown RBP15.06■□□□□ 0
SNF8-206ENST00000509989 CABP7Q86V35 215 aa15.06■□□□□ 0
SNF8-206ENST00000509989 FIBCD1Q8N539 461 aa15.06■□□□□ 0
SNF8-206ENST00000509989 CASD1Q96PB1 797 aa15.06■□□□□ 0
SNF8-206ENST00000509989 GAS2L1Q99501 681 aaPredicted RBP15.06■□□□□ 0
SNF8-206ENST00000509989 EIF2AQ9BY44 585 aaKnown RBP15.06■□□□□ 0
SNF8-206ENST00000509989 C1orf112Q9NSG2 853 aa15.06■□□□□ 0
SNF8-206ENST00000509989 BLOC1S4Q9NUP1 217 aa15.06■□□□□ 0
SNF8-206ENST00000509989 AGPAT5Q9NUQ2 364 aa15.06■□□□□ 0
SNF8-206ENST00000509989 LRFN2Q9ULH4 789 aa15.06■□□□□ 0
SNF8-206ENST00000509989 PCDHB7Q9Y5E2 793 aa15.06■□□□□ 0
SNF8-206ENST00000509989 TDRD15B5MCY1 1934 aaKnown RBP15.05■□□□□ 0
SNF8-206ENST00000509989 LRRIQ4A6NIV6 560 aa15.05■□□□□ -0
SNF8-206ENST00000509989 INO80B-WBP1J3KQ70 363 aa15.05■□□□□ -0
SNF8-206ENST00000509989 B4GALT3O60512 393 aa15.05■□□□□ -0
SNF8-206ENST00000509989 ZSCAN20P17040 1043 aaPredicted RBP15.05■□□□□ -0
SNF8-206ENST00000509989 MUTP22033 750 aa15.05■□□□□ -0
SNF8-206ENST00000509989 SFPQP23246 707 aaKnown RBP eCLIP15.05■□□□□ -0
SNF8-206ENST00000509989 PBX3P40426 434 aa15.05■□□□□ -0
SNF8-206ENST00000509989 PHKA2P46019 1235 aa15.05■□□□□ -0
SNF8-206ENST00000509989 RINT1Q6NUQ1 792 aa15.05■□□□□ -0
SNF8-206ENST00000509989 C1orf186Q6ZWK4 172 aa15.05■□□□□ -0
SNF8-206ENST00000509989 SRGAP1Q7Z6B7 1085 aa15.05■□□□□ -0
SNF8-206ENST00000509989 IFNLR1Q8IU57 520 aaPredicted RBP15.05■□□□□ -0
SNF8-206ENST00000509989 FBXO22Q8NEZ5 403 aa15.05■□□□□ -0
SNF8-206ENST00000509989 HELQQ8TDG4 1101 aa15.05■□□□□ -0
SNF8-206ENST00000509989 INO80BQ9C086 356 aaPredicted RBP15.05■□□□□ -0
SNF8-206ENST00000509989 RNF39Q9H2S5 420 aa15.05■□□□□ -0
SNF8-206ENST00000509989 CWH43Q9H720 699 aa15.05■□□□□ -0
SNF8-206ENST00000509989 TMEM161AQ9NX61 479 aa15.05■□□□□ -0
SNF8-206ENST00000509989 A0A087X0B3 334 aa15.04■□□□□ -0
SNF8-206ENST00000509989 A0A0U1RQF3 1178 aa15.04■□□□□ -0
SNF8-206ENST00000509989 GRM6O15303 877 aa15.04■□□□□ -0
SNF8-206ENST00000509989 ASAP2O43150 1006 aa15.04■□□□□ -0
SNF8-206ENST00000509989 GAS2O43903 313 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 HIP1RO75146 1068 aa15.04■□□□□ -0
SNF8-206ENST00000509989 STAG3L1P0CL83 205 aa15.04■□□□□ -0
SNF8-206ENST00000509989 DNAJB1P25685 340 aa15.04■□□□□ -0
SNF8-206ENST00000509989 CTNNB1P35222 781 aa15.04■□□□□ -0
SNF8-206ENST00000509989 DHX8Q14562 1220 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 ARSHQ5FYA8 562 aa15.04■□□□□ -0
SNF8-206ENST00000509989 ODR4Q5SWX8 454 aa15.04■□□□□ -0
SNF8-206ENST00000509989 TWF2Q6IBS0 349 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 EXOC8Q8IYI6 725 aa15.04■□□□□ -0
SNF8-206ENST00000509989 CMTR2Q8IYT2 770 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 SMG8Q8ND04 991 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 CLP1Q92989 425 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 RAB34Q9BZG1 259 aa15.04■□□□□ -0
SNF8-206ENST00000509989 CXCL16Q9H2A7 254 aa15.04■□□□□ -0
SNF8-206ENST00000509989 ALG13Q9NP73 1137 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 FAM105AQ9NUU6 356 aa15.04■□□□□ -0
SNF8-206ENST00000509989 TYW1Q9NV66 732 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 DAXXQ9UER7 740 aaPredicted RBP15.04■□□□□ -0
SNF8-206ENST00000509989 DNM3Q9UQ16 869 aa15.04■□□□□ -0
SNF8-206ENST00000509989 HES2Q9Y543 173 aa15.04■□□□□ -0
SNF8-206ENST00000509989 PCDHGC5Q9Y5F6 944 aa15.04■□□□□ -0
SNF8-206ENST00000509989 UNC80Q8N2C7 3258 aa15.04■□□□□ -0
SNF8-206ENST00000509989 TCF20Q9UGU0 1960 aaKnown RBP15.04■□□□□ -0
SNF8-206ENST00000509989 F13A1P00488 732 aa15.03■□□□□ -0
SNF8-206ENST00000509989 SSBP05455 408 aaKnown RBP eCLIP15.03■□□□□ -0
SNF8-206ENST00000509989 HSP90AA1P07900 732 aaKnown RBP15.03■□□□□ -0
SNF8-206ENST00000509989 PLA2G4BP0C869 781 aa15.03■□□□□ -0
SNF8-206ENST00000509989 ZSCAN22P10073 491 aaPredicted RBP15.03■□□□□ -0
SNF8-206ENST00000509989 ARF4P18085 180 aaPredicted RBP15.03■□□□□ -0
SNF8-206ENST00000509989 LIG1P18858 919 aa15.03■□□□□ -0
SNF8-206ENST00000509989 PLCG1P19174 1290 aa15.03■□□□□ -0
SNF8-206ENST00000509989 BMPR1AP36894 532 aa15.03■□□□□ -0
SNF8-206ENST00000509989 SLC12A3P55017 1021 aa15.03■□□□□ -0
SNF8-206ENST00000509989 CDC42EP1Q00587 391 aa15.03■□□□□ -0
SNF8-206ENST00000509989 GPM6BQ13491 265 aa15.03■□□□□ -0
SNF8-206ENST00000509989 CAMK1Q14012 370 aa15.03■□□□□ -0
SNF8-206ENST00000509989 MCM6Q14566 821 aa15.03■□□□□ -0
SNF8-206ENST00000509989 MXD4Q14582 209 aaPredicted RBP15.03■□□□□ -0
SNF8-206ENST00000509989 SLC39A14Q15043 492 aa15.03■□□□□ -0
SNF8-206ENST00000509989 AGMOQ6ZNB7 445 aa15.03■□□□□ -0
SNF8-206ENST00000509989 TAS1R3Q7RTX0 852 aa15.03■□□□□ -0
SNF8-206ENST00000509989 ZNF710Q8N1W2 664 aa15.03■□□□□ -0
SNF8-206ENST00000509989 MCPH1Q8NEM0 835 aa15.03■□□□□ -0
SNF8-206ENST00000509989 CCDC113Q9H0I3 377 aa15.03■□□□□ -0
SNF8-206ENST00000509989 ELAC1Q9H777 363 aaKnown RBP15.03■□□□□ -0
SNF8-206ENST00000509989 H3BNC9 293 aa15.02■□□□□ -0
SNF8-206ENST00000509989 ITGB1P05556 798 aa15.02■□□□□ -0
SNF8-206ENST00000509989 POU3F3P20264 500 aaPredicted RBP15.02■□□□□ -0
SNF8-206ENST00000509989 NASPP49321 788 aaPredicted RBP15.02■□□□□ -0
SNF8-206ENST00000509989 TFDP1Q14186 410 aa15.02■□□□□ -0
SNF8-206ENST00000509989 EEF1DP3Q658K8 133 aa15.02■□□□□ -0
SNF8-206ENST00000509989 CDCA2Q69YH5 1023 aaPredicted RBP15.02■□□□□ -0
SNF8-206ENST00000509989 SYT2Q8N9I0 419 aaPredicted RBP15.02■□□□□ -0
SNF8-206ENST00000509989 KLHL23Q8NBE8 558 aa15.02■□□□□ -0
SNF8-206ENST00000509989 SYMPKQ92797 1274 aaKnown RBP15.02■□□□□ -0
SNF8-206ENST00000509989 PANK2Q9BZ23 570 aa15.02■□□□□ -0
SNF8-206ENST00000509989 CHST12Q9NRB3 414 aa15.02■□□□□ -0
SNF8-206ENST00000509989 PCDHB2Q9Y5E7 798 aa15.02■□□□□ -0
SNF8-206ENST00000509989 SRPRBQ9Y5M8 271 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms