RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 COLGALT1Q8NBJ5 622 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 MCPH1Q8NEM0 835 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 MICAL1Q8TDZ2 1067 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 ZNF558Q96NG5 402 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 FAM105AQ9NUU6 356 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 CLDND1Q9NY35 253 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 DBR1Q9UK59 544 aaKnown RBP20.74■□□□□ 0.91
UBE3D-207ENST00000509102 FAM50BQ9Y247 325 aa20.74■□□□□ 0.91
UBE3D-207ENST00000509102 XIRP2A4UGR9 3374 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 USO1O60763 962 aaKnown RBP20.73■□□□□ 0.91
UBE3D-207ENST00000509102 FGF18O76093 207 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 FXR2P51116 673 aaKnown RBP eCLIP20.73■□□□□ 0.91
UBE3D-207ENST00000509102 KRT17Q04695 432 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 POU5F1BQ06416 359 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 LEXMQ3ZCV2 418 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 RILPL1Q5EBL4 403 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 ZNF598Q86UK7 904 aaKnown RBP20.73■□□□□ 0.91
UBE3D-207ENST00000509102 HELQQ8TDG4 1101 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 XPNPEP1Q9NQW7 623 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 LRWD1Q9UFC0 647 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 ARID2Q68CP9 1835 aa20.73■□□□□ 0.91
UBE3D-207ENST00000509102 ARHGEF35A5YM69 484 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 INO80B-WBP1J3KQ70 363 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 MED24O75448 989 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 SPATA31C1P0DKV0 1188 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 AXLP30530 894 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 CCT6AP40227 531 aaKnown RBP20.72■□□□□ 0.91
UBE3D-207ENST00000509102 PTGDRQ13258 359 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 PDIA5Q14554 519 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 CLLU1OSQ5K130 101 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 PDE12Q6L8Q7 609 aaKnown RBP20.72■□□□□ 0.91
UBE3D-207ENST00000509102 CWH43Q9H720 699 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 TLR9Q9NR96 1032 aa20.72■□□□□ 0.91
UBE3D-207ENST00000509102 KIAA1671Q9BY89 1806 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 FSD2A1L4K1 749 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 ZNF623O75123 536 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 CD2BP2O95400 341 aaKnown RBP20.71■□□□□ 0.91
UBE3D-207ENST00000509102 ARL2P36404 184 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 ALDH7A1P49419 539 aaKnown RBP20.71■□□□□ 0.91
UBE3D-207ENST00000509102 PTENP60484 403 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 NBR1Q14596 966 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 NOTUMQ6P988 496 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 POTEGQ6S5H5 508 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 KCNT2Q6UVM3 1135 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 CNNM3Q8NE01 707 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 URGCPQ8TCY9 931 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 CCDC51Q96ER9 411 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 POLR3FQ9H1D9 316 aaPredicted RBP20.71■□□□□ 0.91
UBE3D-207ENST00000509102 IGFLR1Q9H665 355 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 RNF19AQ9NV58 838 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 LZTS1Q9Y250 596 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 PCDHB2Q9Y5E7 798 aa20.71■□□□□ 0.91
UBE3D-207ENST00000509102 ATF7P17544 494 aaPredicted RBP20.7■□□□□ 0.9
UBE3D-207ENST00000509102 RNASELQ05823 741 aaKnown RBP20.7■□□□□ 0.9
UBE3D-207ENST00000509102 HYAL1Q12794 435 aa20.7■□□□□ 0.9
UBE3D-207ENST00000509102 BMS1Q14692 1282 aaKnown RBP20.7■□□□□ 0.9
UBE3D-207ENST00000509102 DTHD1Q6ZMT9 781 aa20.7■□□□□ 0.9
UBE3D-207ENST00000509102 HACE1Q8IYU2 909 aa20.7■□□□□ 0.9
UBE3D-207ENST00000509102 NFKBIZQ9BYH8 718 aa20.7■□□□□ 0.9
UBE3D-207ENST00000509102 MINDY3Q9H8M7 445 aa20.7■□□□□ 0.9
UBE3D-207ENST00000509102 SPG21Q9NZD8 308 aa20.7■□□□□ 0.9
UBE3D-207ENST00000509102 HCSTQ9UBK5 93 aa20.7■□□□□ 0.9
UBE3D-207ENST00000509102 PCDHB6Q9Y5E3 794 aa20.7■□□□□ 0.9
UBE3D-207ENST00000509102 LRRIQ4A6NIV6 560 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 DNAJB1P25685 340 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 PRPHP41219 470 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 TOB1P50616 345 aaPredicted RBP20.69■□□□□ 0.9
UBE3D-207ENST00000509102 PLCB3Q01970 1234 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 CAPSQ13938 189 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 CAMK1Q14012 370 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 NOMO2Q5JPE7 1267 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 KRT79Q5XKE5 535 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 LARP1BQ659C4 914 aaKnown RBP20.69■□□□□ 0.9
UBE3D-207ENST00000509102 PTCRAQ6ISU1 281 aaPredicted RBP20.69■□□□□ 0.9
UBE3D-207ENST00000509102 PADI6Q6TGC4 694 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 LRRC55Q6ZSA7 311 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 MAEAQ7L5Y9 396 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 IFNLR1Q8IU57 520 aaPredicted RBP20.69■□□□□ 0.9
UBE3D-207ENST00000509102 ZBTB8OSQ8IWT0 167 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 ASAP3Q8TDY4 903 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 SNX29Q8TEQ0 813 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 MRPS27Q92552 414 aaKnown RBP20.69■□□□□ 0.9
UBE3D-207ENST00000509102 LPPQ93052 612 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 TRIM6Q9C030 488 aaPredicted RBP20.69■□□□□ 0.9
UBE3D-207ENST00000509102 UBN1Q9NPG3 1134 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 INPP5FQ9Y2H2 1132 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 CNTNAP2Q9UHC6 1331 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 BRWD1Q9NSI6 2320 aa20.69■□□□□ 0.9
UBE3D-207ENST00000509102 A0A087WWV3 80 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 H3BQ06 376 aaPredicted RBP20.68■□□□□ 0.9
UBE3D-207ENST00000509102 GLRA2P23416 452 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 NDUFV1P49821 464 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 COL19A1Q14993 1142 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 LONRF3Q496Y0 759 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 C4orf32Q8N8J7 132 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 TLE6Q9H808 572 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 ENTPD7Q9NQZ7 604 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 KANSL3Q9P2N6 904 aa20.68■□□□□ 0.9
UBE3D-207ENST00000509102 TSPAN1O60635 241 aa20.67■□□□□ 0.9
UBE3D-207ENST00000509102 ZC3H11AO75152 810 aaKnown RBP eCLIP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms