RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ZNF598Q86UK7 904 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 FERMT3Q86UX7 667 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 LRRC43Q8N309 656 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 MICAL1Q8TDZ2 1067 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 CHST12Q9NRB3 414 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 NOL7Q9UMY1 257 aaKnown RBP16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 INPP5FQ9Y2H2 1132 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 PPME1Q9Y570 386 aa16.5■□□□□ 0.23
UBE2D3-228ENST00000508974 MEIS3P2A8K0S8 358 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 SPATA31C1P0DKV0 1188 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 NRIP1P48552 1158 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 RARRES1P49788 294 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 DLX2Q07687 328 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 MCTP1Q6DN14 999 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 POTEGQ6S5H5 508 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 CATSPER3Q86XQ3 398 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 ASAP3Q8TDY4 903 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 TMX3Q96JJ7 454 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 ANKEF1Q9NU02 776 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 AGPAT5Q9NUQ2 364 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 FAM105AQ9NUU6 356 aa16.49■□□□□ 0.23
UBE2D3-228ENST00000508974 GAS2O43903 313 aaKnown RBP16.48■□□□□ 0.23
UBE2D3-228ENST00000508974 LYPLA2O95372 231 aa16.48■□□□□ 0.23
UBE2D3-228ENST00000508974 EOMESO95936 686 aa16.48■□□□□ 0.23
UBE2D3-228ENST00000508974 ERVFC1P60507 584 aa16.48■□□□□ 0.23
UBE2D3-228ENST00000508974 KCNT2Q6UVM3 1135 aa16.48■□□□□ 0.23
UBE2D3-228ENST00000508974 SRGAP1Q7Z6B7 1085 aa16.48■□□□□ 0.23
UBE2D3-228ENST00000508974 ZNF558Q96NG5 402 aa16.48■□□□□ 0.23
UBE2D3-228ENST00000508974 TLR9Q9NR96 1032 aa16.48■□□□□ 0.23
UBE2D3-228ENST00000508974 C5orf42Q9H799 3197 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 NT5C1B-RDH14C9J2C7 533 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 INO80B-WBP1J3KQ70 363 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 PER2O15055 1255 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 ASAP2O43150 1006 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 TBX10O75333 385 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 DGAT1O75907 488 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 ERLIN2O94905 339 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 GJB2P29033 226 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 LTBRP36941 435 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 NDUFV1P49821 464 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 CAPSQ13938 189 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 PLPP4Q5VZY2 271 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 ERMNQ8TAM6 284 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 PPP2R3CQ969Q6 453 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 CPB2Q96IY4 423 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 TBC1D32Q96NH3 1257 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 GBP3Q9H0R5 595 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 POLR3FQ9H1D9 316 aaPredicted RBP16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 TUFT1Q9NNX1 390 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 PCDHB2Q9Y5E7 798 aa16.47■□□□□ 0.23
UBE2D3-228ENST00000508974 NCOR1O75376 2440 aa16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 ZC3H11AO75152 810 aaKnown RBP eCLIP16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 U2AF2P26368 475 aaKnown RBP eCLIP16.46■□□□□ 0.233e-9■■□□□ 12.6
UBE2D3-228ENST00000508974 CA8P35219 290 aa16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 TOB1P50616 345 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 RBM10P98175 930 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 TFDP1Q14186 410 aa16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 MXD4Q14582 209 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 COL19A1Q14993 1142 aa16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 CSPP1Q1MSJ5 1256 aa16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 MRPL9Q9BYD2 267 aaKnown RBP16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 ENTPD7Q9NQZ7 604 aa16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 KIF3AQ9Y496 699 aa16.46■□□□□ 0.23
UBE2D3-228ENST00000508974 GRXCR2A6NFK2 248 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 NCK2O43639 380 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 TSPAN1O60635 241 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 SKIP12755 728 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 GLRA2P23416 452 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 HOXA11P31270 313 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 ARL2P36404 184 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 CCT6AP40227 531 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 TRAPPC10P48553 1259 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 RAB27AP51159 221 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 BCAR1P56945 870 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 PTENP60484 403 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 UBE3AQ05086 875 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 RNASELQ05823 741 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 PTGDRQ13258 359 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 ORC2Q13416 577 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 CTC1Q2NKJ3 1217 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 UBXN11Q5T124 520 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 GLB1LQ6UWU2 654 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 C4orf32Q8N8J7 132 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 MRPS27Q92552 414 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 NACC1Q96RE7 527 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 TCF25Q9BQ70 676 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 POLR3CQ9BUI4 534 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 TRAIPQ9BWF2 469 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 TLE6Q9H808 572 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 CD320Q9NPF0 282 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 SPG21Q9NZD8 308 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 LRWD1Q9UFC0 647 aa16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 BARX2Q9UMQ3 279 aaPredicted RBP16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 TDRD15B5MCY1 1934 aaKnown RBP16.45■□□□□ 0.22
UBE2D3-228ENST00000508974 ARHGEF35A5YM69 484 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 LRRIQ4A6NIV6 560 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 H3BQV1 296 aa16.44■□□□□ 0.22
UBE2D3-228ENST00000508974 RPA1P27694 616 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms