RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 CHMP5Q9NZZ3 219 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 TBC1D14Q9P2M4 693 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 CAB39Q9Y376 341 aaPredicted RBP8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 PCDHB5Q9Y5E4 795 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 USP3Q9Y6I4 520 aa8.21□□□□□ -1.1
PDGFRA-206ENST00000508170 FGD5Q6ZNL6 1462 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 POTEB3A0JP26 581 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 CTAGE9A4FU28 777 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 RGSL1A5PLK6 1076 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 ACKR2O00590 384 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 IKBKBO14920 756 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 PTP4A3O75365 173 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 PGM3O95394 542 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 HEXBP07686 556 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 GNL1P36915 607 aaPredicted RBP8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 PPP2R2AP63151 447 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 DSG1Q02413 1049 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 SNAPC2Q13487 334 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 ACAP2Q15057 778 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 SMAD2Q15796 467 aaKnown RBP8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 CNGA3Q16281 694 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 INAQ16352 499 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 RTN1Q16799 776 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 FBXO47Q5MNV8 452 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 IYDQ6PHW0 289 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 POTEBQ6S5H4 581 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 PACS2Q86VP3 889 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 KCTD6Q8NC69 237 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 AGBL5Q8NDL9 886 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 CHST13Q8NET6 341 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 ZFAND2BQ8WV99 257 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 KLHL6Q8WZ60 621 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 HSPH1Q92598 858 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 ZUFSPQ96AP4 578 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 TRIM47Q96LD4 638 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 CCDC74BQ96LY2 380 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 CCDC43Q96MW1 224 aaKnown RBP8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 DACH2Q96NX9 599 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 TM9SF2Q99805 663 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 TRIM7Q9C029 511 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 ADAM19Q9H013 955 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 ATP13A1Q9HD20 1204 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 MED4Q9NPJ6 270 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 HOMER3Q9NSC5 361 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 ADPRHL2Q9NX46 363 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 AKAP7Q9P0M2 348 aaPredicted RBP8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 KIAA1468Q9P260 1216 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 EXOC7Q9UPT5 735 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 TLL2Q9Y6L7 1015 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 MAP3K1Q13233 1512 aa8.2□□□□□ -1.1
PDGFRA-206ENST00000508170 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 SLC12A8A0AV02 714 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 HNRNPCL2B2RXH8 293 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 EREGO14944 169 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 HNRNPCL1O60812 293 aaKnown RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 KERAO60938 352 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ULK1O75385 1050 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 SLU7O95391 586 aaKnown RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 GSNP06396 782 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 SNRPA1P09661 255 aaKnown RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 MAPK4P31152 587 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 WNT7BP56706 349 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 NEDD9Q14511 834 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 KRT71Q3SY84 523 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 CCDC178Q5BJE1 867 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 MEX3BQ6ZN04 569 aaKnown RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 SAMD7Q7Z3H4 446 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 COL23A1Q86Y22 540 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 RPAP2Q8IXW5 612 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 GALNT15Q8N3T1 639 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 HERVK_113Q902F9 699 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 PTP4A1Q93096 173 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 RILPL2Q969X0 211 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ACSF2Q96CM8 615 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 GIMAP5Q96F15 307 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 MS4A3Q96HJ5 214 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 AK8Q96MA6 479 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ZCWPW1Q9H0M4 648 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 NT5C3AQ9H0P0 336 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 SPTLC3Q9NUV7 552 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 KIF17Q9P2E2 1029 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 CCNB3Q8WWL7 1395 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ARHGAP10A1A4S6 786 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ZSCAN5CA6NGD5 496 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ENC1O14682 589 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 PRPSAP2O60256 369 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 SEC22BO75396 215 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 HLA-DPA1P20036 260 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 GRIA2P42262 883 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ARF3P61204 181 aaPredicted RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 COG7P83436 770 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ARF1P84077 181 aaKnown RBP8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 DEUP1Q05D60 604 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 COASYQ13057 564 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 PFKFB4Q16877 469 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 PROSER3Q2NL68 480 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 ALG11Q2TAA5 492 aa8.19□□□□□ -1.1
PDGFRA-206ENST00000508170 OLFM4Q6UX06 510 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms