RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 C5orf67F2Z3F1 127 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 SLC26A4O43511 780 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 STX6O43752 255 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 EYA4O95677 639 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 SSBP05455 408 aaKnown RBP eCLIP17.32■□□□□ 0.36
COL1A1-211ENST00000507689 FGFR1P11362 822 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 LAG3P18627 525 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 SF3A1Q15459 793 aaKnown RBP17.32■□□□□ 0.36
COL1A1-211ENST00000507689 GLB1LQ6UWU2 654 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 SPRED2Q7Z698 418 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 CCDC51Q96ER9 411 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 NFKBIZQ9BYH8 718 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 RC3H2Q9HBD1 1191 aaKnown RBP17.32■□□□□ 0.36
COL1A1-211ENST00000507689 FAM105AQ9NUU6 356 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 THEGQ9P2T0 379 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 KCNG1Q9UIX4 513 aa17.32■□□□□ 0.36
COL1A1-211ENST00000507689 GLRA2P23416 452 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 LONP1P36776 959 aaKnown RBP17.31■□□□□ 0.36
COL1A1-211ENST00000507689 TXLNAP40222 546 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 CAPSQ13938 189 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 APBB1IPQ7Z5R6 666 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-211ENST00000507689 CABP7Q86V35 215 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 THNSL1Q8IYQ7 743 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 CRIPAKQ8N1N5 446 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 URGCPQ8TCY9 931 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 ASAP3Q8TDY4 903 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 P2RX5Q93086 422 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 DRC1Q96MC2 740 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 TRAIPQ9BWF2 469 aa17.31■□□□□ 0.36
COL1A1-211ENST00000507689 PRMT7Q9NVM4 692 aaPredicted RBP17.31■□□□□ 0.36
COL1A1-211ENST00000507689 PP2D1A8MPX8 630 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 LPXNO60711 386 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 CDC25AP30304 524 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 GATMP50440 423 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
COL1A1-211ENST00000507689 BMS1Q14692 1282 aaKnown RBP17.3■□□□□ 0.36
COL1A1-211ENST00000507689 IFNLR1Q8IU57 520 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-211ENST00000507689 HELQQ8TDG4 1101 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 ZNF396Q96N95 335 aaPredicted RBP17.3■□□□□ 0.36
COL1A1-211ENST00000507689 TIPINQ9BVW5 301 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 UBN1Q9NPG3 1134 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 GPRC5CQ9NQ84 441 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 TYW1Q9NV66 732 aaKnown RBP17.3■□□□□ 0.36
COL1A1-211ENST00000507689 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
COL1A1-211ENST00000507689 COG5Q9UP83 839 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 PCDHB2Q9Y5E7 798 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 ARID2Q68CP9 1835 aa17.3■□□□□ 0.36
COL1A1-211ENST00000507689 PHLPP2Q6ZVD8 1323 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 E9PMD0 336 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 LIG1P18858 919 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 PPM1AP35813 382 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 NAMPTP43490 491 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 EFNA5P52803 228 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 KRT17Q04695 432 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 DMP1Q13316 513 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-211ENST00000507689 IL17AQ16552 155 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 MAPK6Q16659 721 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 MICAL1Q8TDZ2 1067 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 ATXN2LQ8WWM7 1075 aaKnown RBP17.29■□□□□ 0.36
COL1A1-211ENST00000507689 PRIMPOLQ96LW4 560 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 ZNF558Q96NG5 402 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 FAM193BQ96PV7 902 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-211ENST00000507689 MINDY3Q9H8M7 445 aa17.29■□□□□ 0.36
COL1A1-211ENST00000507689 DAXXQ9UER7 740 aaPredicted RBP17.29■□□□□ 0.36
COL1A1-211ENST00000507689 CNTNAP2Q9UHC6 1331 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 MYO9BQ13459 2157 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 CCDC169A6NNP5 214 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 TSPAN1O60635 241 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 ZNF623O75123 536 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 ITGA4P13612 1032 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 ALDH7A1P49419 539 aaKnown RBP17.28■□□□□ 0.36
COL1A1-211ENST00000507689 MRPS5P82675 430 aaKnown RBP17.28■□□□□ 0.36
COL1A1-211ENST00000507689 CEBPZQ03701 1054 aaKnown RBP17.28■□□□□ 0.36
COL1A1-211ENST00000507689 MBTD1Q05BQ5 628 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 ECM1Q16610 540 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 KLHL23Q8NBE8 558 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 SYMPKQ92797 1274 aaKnown RBP17.28■□□□□ 0.36
COL1A1-211ENST00000507689 HLA-CQ95604 372 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 CASD1Q96PB1 797 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 ADPGKQ9BRR6 497 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 CSRNP2Q9H175 543 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
COL1A1-211ENST00000507689 ALG13Q9NP73 1137 aaKnown RBP17.28■□□□□ 0.36
COL1A1-211ENST00000507689 KCND2Q9NZV8 630 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 KANSL3Q9P2N6 904 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 CCDC39Q9UFE4 941 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 PLAGL2Q9UPG8 496 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 INPP5FQ9Y2H2 1132 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 RALGAPA2Q2PPJ7 1873 aa17.28■□□□□ 0.36
COL1A1-211ENST00000507689 NCK2O43639 380 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 KRT18P05783 430 aaKnown RBP17.27■□□□□ 0.36
COL1A1-211ENST00000507689 SMTNP53814 917 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 UBE3AQ05086 875 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 RESTQ13127 1097 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 PRPF4BQ13523 1007 aaKnown RBP17.27■□□□□ 0.36
COL1A1-211ENST00000507689 LONRF3Q496Y0 759 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 NOMO2Q5JPE7 1267 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 EP400NLQ6ZTU2 488 aa17.27■□□□□ 0.36
COL1A1-211ENST00000507689 ZNF598Q86UK7 904 aaKnown RBP17.27■□□□□ 0.36
COL1A1-211ENST00000507689 COLGALT1Q8NBJ5 622 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms