RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 KIF11P52732 1056 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 SLC25A3Q00325 362 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 FKBP15Q5T1M5 1219 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 PRAMEF9Q5VWM5 478 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 KIAA0907Q7Z7F0 614 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 DDX53Q86TM3 631 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 ZNF366Q8N895 744 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 SLC25A43Q8WUT9 341 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 ATXN2LQ8WWM7 1075 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 FOXRED1Q96CU9 486 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 SCLYQ96I15 445 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 DYDC2Q96IM9 177 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 MRPL4Q9BYD3 311 aaKnown RBP3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 TRIM39Q9HCM9 518 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 POLR3BQ9NW08 1133 aaPredicted RBP3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 FANCLQ9NW38 375 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 GPRC5BQ9NZH0 403 aa3.87□□□□□ -1.79
TOPBP1-205ENST00000506779 CCDC163A0A0D9SF12 145 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 TCRBV16S1A1N1A0A5B0 115 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 C2orf78A6NCI8 922 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 GOLGA6L6A8MZA4 724 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 PPP1R12AO14974 1030 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 DAPK3O43293 454 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 MFAP3LO75121 409 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 CDC45O75419 566 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 IPO13O94829 963 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 TOX4O94842 621 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 VSIG10L2P0DP72 767 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 TOB2Q14106 344 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 ARHGAP44Q17R89 818 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 GAGE13Q4V321 117 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 PLEKHG4Q58EX7 1191 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 TTC38Q5R3I4 469 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 SDE2Q6IQ49 451 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 MFSD5Q6N075 450 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 HOMER1Q86YM7 354 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 ELOA2Q8IYF1 753 aaPredicted RBP3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 PLA2G15Q8NCC3 412 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 APPBP2Q92624 585 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 RPGRQ92834 1020 aaKnown RBP3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 HAS1Q92839 578 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 MAML3Q96JK9 1138 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 WDR92Q96MX6 357 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 KCMF1Q9P0J7 381 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 DNAI1Q9UI46 699 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 COX11Q9Y6N1 276 aa3.86□□□□□ -1.79
TOPBP1-205ENST00000506779 FAM83GA6ND36 823 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 H7C1D1 291 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 M0R2C6 588 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 PLD2O14939 933 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 ASMTLO95671 621 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 JUNP05412 331 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 RABL3Q5HYI8 236 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 ABHD17CQ6PCB6 329 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 C16orf86Q6ZW13 317 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 OTOP1Q7RTM1 612 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 FGD2Q7Z6J4 655 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 ZNF276Q8N554 614 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 CLUHP3Q96NS8 147 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 TUBGCP5Q96RT8 1024 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 FEZ1Q99689 392 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 C14orf93Q9H972 538 aaKnown RBP3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 SAMD15Q9P1V8 674 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 SYNPO2Q9UMS6 1093 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 CD2APQ9Y5K6 639 aa3.85□□□□□ -1.79
TOPBP1-205ENST00000506779 KLRG2A4D1S0 409 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 B4E1Z4 1266 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 PPFIA4O75335 1185 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 RFPL3O75679 317 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 DNAJC8O75937 253 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 RAPGEF3O95398 923 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 ZBTB48P10074 688 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 GNAT2P19087 354 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 NPEPPSP55786 919 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 BCAR1P56945 870 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 ANTXR2P58335 489 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 ADAM8P78325 824 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 TCEA2Q15560 299 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 ZNF174Q15697 407 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 FNDC3BQ53EP0 1204 aaKnown RBP3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 KCNV1Q6PIU1 500 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 BMP8AQ7Z5Y6 402 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 MRGPREQ86SM8 312 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 CLEC14AQ86T13 490 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 VRK3Q8IV63 474 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 SYNPOQ8N3V7 929 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 CHST14Q8NCH0 376 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 PROKR1Q8TCW9 393 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 NKD2Q969F2 451 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 ZNF512Q96ME7 567 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 FAM193BQ96PV7 902 aaPredicted RBP3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 MNTQ99583 582 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 CABP5Q9NP86 173 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 ACSS2Q9NR19 701 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 RNF7Q9UBF6 113 aa3.84□□□□□ -1.79
TOPBP1-205ENST00000506779 MAFGO15525 162 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 GLRX3O76003 335 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 APOL3O95236 402 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 ABHD16AO95870 558 aa3.83□□□□□ -1.8
TOPBP1-205ENST00000506779 CYP17A1P05093 508 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms