RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 PRKAG3Q9UGI9 489 aa17.31■□□□□ 0.36
DDR1-258ENST00000506573 MUC3AQ02505 3323 aa17.31■□□□□ 0.36
DDR1-258ENST00000506573 WDR81Q562E7 1941 aa17.31■□□□□ 0.36
DDR1-258ENST00000506573 OR52Z1P0C646 297 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 AXLP30530 894 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 RNASELQ05823 741 aaKnown RBP17.3■□□□□ 0.36
DDR1-258ENST00000506573 CTC1Q2NKJ3 1217 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 HAUS3Q68CZ6 603 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 ZNF598Q86UK7 904 aaKnown RBP17.3■□□□□ 0.36
DDR1-258ENST00000506573 FERMT3Q86UX7 667 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 HACE1Q8IYU2 909 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 EFHBQ8N7U6 833 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 TMEM87AQ8NBN3 555 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 CNNM3Q8NE01 707 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 NACC1Q96RE7 527 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 IFT122Q9HBG6 1241 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 UBN1Q9NPG3 1134 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 ENTPD7Q9NQZ7 604 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 BMP2KQ9NSY1 1161 aaPredicted RBP17.3■□□□□ 0.36
DDR1-258ENST00000506573 STK39Q9UEW8 545 aa17.3■□□□□ 0.36
DDR1-258ENST00000506573 ZNF623O75123 536 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 DNAJB1P25685 340 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 NRIP1P48552 1158 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 MCM2P49736 904 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 POU5F1BQ06416 359 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 ST3GAL1Q11201 340 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 ADAM15Q13444 863 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 TTC38Q5R3I4 469 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 FAM178BQ8IXR5 827 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 GJD3Q8N144 294 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 ZNF579Q8NAF0 562 aaKnown RBP17.29■□□□□ 0.36
DDR1-258ENST00000506573 MCPH1Q8NEM0 835 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 CCDC51Q96ER9 411 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 TMEM169Q96HH4 297 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 KANSL3Q9P2N6 904 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 CD207Q9UJ71 328 aa17.29■□□□□ 0.36
DDR1-258ENST00000506573 CNTNAP2Q9UHC6 1331 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 MUTP22033 750 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 TECP42680 631 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 SMAD4Q13485 552 aaKnown RBP17.28■□□□□ 0.36
DDR1-258ENST00000506573 CAMK1Q14012 370 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 ZNF174Q15697 407 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 NOMO2Q5JPE7 1267 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 CLLU1OSQ5K130 101 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 NOTUMQ6P988 496 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 TMC7Q7Z402 723 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 RBM23Q86U06 439 aaKnown RBP17.28■□□□□ 0.36
DDR1-258ENST00000506573 FAM193BQ96PV7 902 aaPredicted RBP17.28■□□□□ 0.36
DDR1-258ENST00000506573 TCF25Q9BQ70 676 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 POLR3CQ9BUI4 534 aaPredicted RBP17.28■□□□□ 0.36
DDR1-258ENST00000506573 PCDHB2Q9Y5E7 798 aa17.28■□□□□ 0.36
DDR1-258ENST00000506573 POTEMA6NI47 508 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 INO80B-WBP1J3KQ70 363 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 ZBTB39O15060 712 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 IL9P15248 144 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 IRS1P35568 1242 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 RARRES1P49788 294 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 LRRC55Q6ZSA7 311 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 PIGOQ8TEQ8 1089 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 KIF2CQ99661 725 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 TRIM6Q9C030 488 aaPredicted RBP17.27■□□□□ 0.36
DDR1-258ENST00000506573 TMEM60Q9H2L4 133 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 RNF19AQ9NV58 838 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 DBR1Q9UK59 544 aaKnown RBP17.27■□□□□ 0.36
DDR1-258ENST00000506573 INPP5FQ9Y2H2 1132 aa17.27■□□□□ 0.36
DDR1-258ENST00000506573 TCF20Q9UGU0 1960 aaKnown RBP17.27■□□□□ 0.36
DDR1-258ENST00000506573 BRWD1Q9NSI6 2320 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 ARHGEF35A5YM69 484 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 LAD1O00515 517 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 USO1O60763 962 aaKnown RBP17.26■□□□□ 0.35
DDR1-258ENST00000506573 ZC3H11AO75152 810 aaKnown RBP eCLIP17.26■□□□□ 0.35
DDR1-258ENST00000506573 ALADP13716 330 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 RPA1P27694 616 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 CA8P35219 290 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 LTBRP36941 435 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 BCAR1P56945 870 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 PTENP60484 403 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 GIT2Q14161 759 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 SMC1AQ14683 1233 aaKnown RBP17.26■□□□□ 0.35
DDR1-258ENST00000506573 CLUL1Q15846 466 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 PLPP4Q5VZY2 271 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 ZBTB8OSQ8IWT0 167 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 ADHFE1Q8IWW8 467 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 NFKBIZQ9BYH8 718 aa17.26■□□□□ 0.35
DDR1-258ENST00000506573 DAXXQ9UER7 740 aaPredicted RBP17.26■□□□□ 0.35
DDR1-258ENST00000506573 FNDC1Q4ZHG4 1894 aaPredicted RBP17.26■□□□□ 0.35
DDR1-258ENST00000506573 H3BQV1 296 aa17.25■□□□□ 0.35
DDR1-258ENST00000506573 NR1I2O75469 434 aa17.25■□□□□ 0.35
DDR1-258ENST00000506573 ITGA4P13612 1032 aa17.25■□□□□ 0.35
DDR1-258ENST00000506573 ATF7P17544 494 aaPredicted RBP17.25■□□□□ 0.35
DDR1-258ENST00000506573 U2AF2P26368 475 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDR1-258ENST00000506573 GTF2F1P35269 517 aaKnown RBP eCLIP17.25■□□□□ 0.35
DDR1-258ENST00000506573 ARL2P36404 184 aa17.25■□□□□ 0.35
DDR1-258ENST00000506573 ERVFC1P60507 584 aa17.25■□□□□ 0.35
DDR1-258ENST00000506573 SMAD2Q15796 467 aaKnown RBP17.25■□□□□ 0.35
DDR1-258ENST00000506573 MCTP1Q6DN14 999 aa17.25■□□□□ 0.35
DDR1-258ENST00000506573 ADGRD2Q7Z7M1 963 aa17.25■□□□□ 0.35
DDR1-258ENST00000506573 CATSPER3Q86XQ3 398 aa17.25■□□□□ 0.35
DDR1-258ENST00000506573 IFNLR1Q8IU57 520 aaPredicted RBP17.25■□□□□ 0.35
DDR1-258ENST00000506573 SLC39A11Q8N1S5 342 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms