RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 TBC1D13Q9NVG8 400 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 VAV3Q9UKW4 847 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 INPP5FQ9Y2H2 1132 aa12.75□□□□□ -0.37
SIL1-208ENST00000505945 CCDC194A0A1B0GVG4 234 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 ZNF623O75123 536 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 OFD1O75665 1012 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 SKIP12755 728 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 RNASELQ05823 741 aaKnown RBP12.74□□□□□ -0.37
SIL1-208ENST00000505945 SCRN1Q12765 414 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 PPP2R5CQ13362 524 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 BMS1Q14692 1282 aaKnown RBP12.74□□□□□ -0.37
SIL1-208ENST00000505945 TPRNQ4KMQ1 711 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 NOMO2Q5JPE7 1267 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 CES5AQ6NT32 575 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 KANK3Q6NY19 840 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 ZBTB33Q86T24 672 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 FAM177A1Q8N128 213 aaPredicted RBP12.74□□□□□ -0.37
SIL1-208ENST00000505945 FBXL6Q8N531 539 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 C12orf76Q8N812 135 aaPredicted RBP12.74□□□□□ -0.37
SIL1-208ENST00000505945 PRSS33Q8NF86 280 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 BCL7CQ8WUZ0 217 aaPredicted RBP12.74□□□□□ -0.37
SIL1-208ENST00000505945 PRPF31Q8WWY3 499 aaKnown RBP12.74□□□□□ -0.37
SIL1-208ENST00000505945 TMEM143Q96AN5 459 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 ASIC4Q96FT7 647 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 IGSF21Q96ID5 467 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 FAM20AQ96MK3 541 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 JPH2Q9BR39 696 aaPredicted RBP12.74□□□□□ -0.37
SIL1-208ENST00000505945 GBP3Q9H0R5 595 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 ADAM7Q9H2U9 754 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 KCNMB3Q9NPA1 279 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 WRAP73Q9P2S5 460 aaPredicted RBP12.74□□□□□ -0.37
SIL1-208ENST00000505945 DNAJB4Q9UDY4 337 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 MYO10Q9HD67 2058 aa12.74□□□□□ -0.37
SIL1-208ENST00000505945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.73□□□□□ -0.37
SIL1-208ENST00000505945 P4HBP07237 508 aaKnown RBP12.73□□□□□ -0.37
SIL1-208ENST00000505945 GALTP07902 379 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 WEE2P0C1S8 567 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 SRGAP2CP0DJJ0 459 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 POLGP54098 1239 aaPredicted RBP12.73□□□□□ -0.37
SIL1-208ENST00000505945 ITIH3Q06033 890 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 PPP4R3AQ6IN85 833 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 PIK3AP1Q6ZUJ8 805 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 NEK8Q86SG6 692 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 DDX53Q86TM3 631 aaKnown RBP12.73□□□□□ -0.37
SIL1-208ENST00000505945 ZNF280BQ86YH2 543 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 TMEM87AQ8NBN3 555 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 OXER1Q8TDS5 423 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 SLC7A3Q8WY07 619 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 HAS1Q92839 578 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 CEP170P1Q96L14 293 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 ZBP1Q9H171 429 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 POMKQ9H5K3 350 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 MINDY3Q9H8M7 445 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
SIL1-208ENST00000505945 RGL1Q9NZL6 768 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 PCDHB2Q9Y5E7 798 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 COL4A3BPQ9Y5P4 624 aa12.73□□□□□ -0.37
SIL1-208ENST00000505945 MARCH6O60337 910 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 B4GALT3O60512 393 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 CCNT1O60563 726 aaKnown RBP12.72□□□□□ -0.37
SIL1-208ENST00000505945 DKC1O60832 514 aaKnown RBP eCLIP12.72□□□□□ -0.37
SIL1-208ENST00000505945 CDKL5O76039 1030 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 CTSAP10619 480 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 GCFC2P16383 781 aaKnown RBP12.72□□□□□ -0.37
SIL1-208ENST00000505945 EPCAMP16422 314 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 SLC11A1P49279 550 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 RAB27AP51159 221 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 AFF1P51825 1210 aaKnown RBP12.72□□□□□ -0.37
SIL1-208ENST00000505945 VCPP55072 806 aaKnown RBP12.72□□□□□ -0.37
SIL1-208ENST00000505945 RARS2Q5T160 578 aaKnown RBP12.72□□□□□ -0.37
SIL1-208ENST00000505945 AGMOQ6ZNB7 445 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 KREMEN2Q8NCW0 462 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 PSPC1Q8WXF1 523 aaKnown RBP12.72□□□□□ -0.37
SIL1-208ENST00000505945 RSPH1Q8WYR4 309 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 PGBD4Q96DM1 585 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 NECTIN4Q96NY8 510 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 DHX33Q9H6R0 707 aaKnown RBP12.72□□□□□ -0.37
SIL1-208ENST00000505945 AGPAT5Q9NUQ2 364 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 TPCN1Q9ULQ1 816 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 NR2E1Q9Y466 385 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 CACNA1HO95180 2353 aa12.72□□□□□ -0.37
SIL1-208ENST00000505945 C2CD4DB7Z1M9 353 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 ZBTB39O15060 712 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 TBX3O15119 743 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 DDHD2O94830 711 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 PDGFBP01127 241 aaPredicted RBP12.71□□□□□ -0.37
SIL1-208ENST00000505945 XBP1P17861 261 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 AVPR2P30518 371 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 HOXA11P31270 313 aaPredicted RBP12.71□□□□□ -0.37
SIL1-208ENST00000505945 YWHABP31946 246 aaKnown RBP12.71□□□□□ -0.37
SIL1-208ENST00000505945 RFC5P40937 340 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 MTHFRP42898 656 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 CYP4A11Q02928 519 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 LAMTOR4Q0VGL1 99 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 CTTNQ14247 550 aaKnown RBP12.71□□□□□ -0.37
SIL1-208ENST00000505945 EPHA7Q15375 998 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 EARS2Q5JPH6 523 aaKnown RBP12.71□□□□□ -0.37
SIL1-208ENST00000505945 ATAT1Q5SQI0 421 aa12.71□□□□□ -0.37
SIL1-208ENST00000505945 UBXN11Q5T124 520 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms