RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 EPHA7Q15375 998 aa27.61■■■□□ 2.01
HERC4-212ENST00000505760 NCAPH2Q6IBW4 605 aa27.61■■■□□ 2.01
HERC4-212ENST00000505760 SLFN12Q8IYM2 578 aa27.61■■■□□ 2.01
HERC4-212ENST00000505760 ZNF579Q8NAF0 562 aaKnown RBP27.61■■■□□ 2.01
HERC4-212ENST00000505760 PRPF31Q8WWY3 499 aaKnown RBP27.61■■■□□ 2.01
HERC4-212ENST00000505760 PSPC1Q8WXF1 523 aaKnown RBP27.61■■■□□ 2.01
HERC4-212ENST00000505760 SUSD6Q92537 303 aa27.61■■■□□ 2.01
HERC4-212ENST00000505760 DHX33Q9H6R0 707 aaKnown RBP27.61■■■□□ 2.01
HERC4-212ENST00000505760 IFT122Q9HBG6 1241 aa27.61■■■□□ 2.01
HERC4-212ENST00000505760 WRAP73Q9P2S5 460 aaPredicted RBP27.61■■■□□ 2.01
HERC4-212ENST00000505760 WDFY4Q6ZS81 3184 aa27.61■■■□□ 2.01
HERC4-212ENST00000505760 SRGAP2CP0DJJ0 459 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 YWHABP31946 246 aaKnown RBP27.6■■■□□ 2.01
HERC4-212ENST00000505760 KRT2P35908 639 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 RFC5P40937 340 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 EARS2Q5JPH6 523 aaKnown RBP27.6■■■□□ 2.01
HERC4-212ENST00000505760 HFE2Q6ZVN8 426 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 OTUD6AQ7L8S5 288 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 C4orf19Q8IY42 314 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 MRPL43Q8N983 215 aaKnown RBP27.6■■■□□ 2.01
HERC4-212ENST00000505760 EDAQ92838 391 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 TMEM143Q96AN5 459 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 RGL1Q9NZL6 768 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 INPP5FQ9Y2H2 1132 aa27.6■■■□□ 2.01
HERC4-212ENST00000505760 HOXB8P17481 243 aaPredicted RBP27.59■■■□□ 2.01
HERC4-212ENST00000505760 RNASELQ05823 741 aaKnown RBP27.59■■■□□ 2.01
HERC4-212ENST00000505760 NR5A1Q13285 461 aa27.59■■■□□ 2.01
HERC4-212ENST00000505760 CBX2Q14781 532 aaPredicted RBP27.59■■■□□ 2.01
HERC4-212ENST00000505760 NOMO2Q5JPE7 1267 aa27.59■■■□□ 2.01
HERC4-212ENST00000505760 NECAB1Q8N987 351 aa27.59■■■□□ 2.01
HERC4-212ENST00000505760 APOL5Q9BWW9 433 aa27.59■■■□□ 2.01
HERC4-212ENST00000505760 ZSWIM4Q9H7M6 989 aa27.59■■■□□ 2.01
HERC4-212ENST00000505760 BMP2KQ9NSY1 1161 aaPredicted RBP27.59■■■□□ 2.01
HERC4-212ENST00000505760 AGPAT5Q9NUQ2 364 aa27.59■■■□□ 2.01
HERC4-212ENST00000505760 ARID2Q68CP9 1835 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 CARNS1A5YM72 827 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 FAM205CA6NFA0 338 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 C2orf71A6NGG8 1288 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 ZNF623O75123 536 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 XKR9Q5GH70 373 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 SYCE2Q6PIF2 218 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 TCP11Q8WWU5 503 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 CASP10Q92851 521 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 PGBD4Q96DM1 585 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 DYDC2Q96IM9 177 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 S1PR5Q9H228 398 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 TBC1D13Q9NVG8 400 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 PPP4R2Q9NY27 417 aa27.58■■■□□ 2.01
HERC4-212ENST00000505760 TECTAO75443 2155 aa27.58■■■□□ 2
HERC4-212ENST00000505760 MEIS3P2A8K0S8 358 aa27.57■■■□□ 2
HERC4-212ENST00000505760 GAS2O43903 313 aaKnown RBP27.57■■■□□ 2
HERC4-212ENST00000505760 FDPSP14324 419 aaKnown RBP27.57■■■□□ 2
HERC4-212ENST00000505760 CYP4A11Q02928 519 aa27.57■■■□□ 2
HERC4-212ENST00000505760 LAMTOR4Q0VGL1 99 aa27.57■■■□□ 2
HERC4-212ENST00000505760 CTTNQ14247 550 aaKnown RBP27.57■■■□□ 2
HERC4-212ENST00000505760 EMC2Q15006 297 aa27.57■■■□□ 2
HERC4-212ENST00000505760 SRGAP1Q7Z6B7 1085 aa27.57■■■□□ 2
HERC4-212ENST00000505760 TMEM87AQ8NBN3 555 aa27.57■■■□□ 2
HERC4-212ENST00000505760 GTF3C6Q969F1 213 aa27.57■■■□□ 2
HERC4-212ENST00000505760 MFSD14AQ96MC6 490 aa27.57■■■□□ 2
HERC4-212ENST00000505760 PCDHB2Q9Y5E7 798 aa27.57■■■□□ 2
HERC4-212ENST00000505760 CXCL14O95715 111 aa27.56■■■□□ 2
HERC4-212ENST00000505760 HOXD11P31277 338 aaPredicted RBP27.56■■■□□ 2
HERC4-212ENST00000505760 SPIRE1Q08AE8 756 aa27.56■■■□□ 2
HERC4-212ENST00000505760 ME3Q16798 604 aa27.56■■■□□ 2
HERC4-212ENST00000505760 TPRNQ4KMQ1 711 aa27.56■■■□□ 2
HERC4-212ENST00000505760 TPH2Q8IWU9 490 aa27.56■■■□□ 2
HERC4-212ENST00000505760 VPS52Q8N1B4 723 aa27.56■■■□□ 2
HERC4-212ENST00000505760 GBP3Q9H0R5 595 aa27.56■■■□□ 2
HERC4-212ENST00000505760 HCFC2Q9Y5Z7 792 aa27.56■■■□□ 2
HERC4-212ENST00000505760 ASAP2O43150 1006 aa27.55■■■□□ 2
HERC4-212ENST00000505760 OFD1O75665 1012 aa27.55■■■□□ 2
HERC4-212ENST00000505760 TMEM173Q86WV6 379 aaPredicted RBP27.55■■■□□ 2
HERC4-212ENST00000505760 URGCPQ8TCY9 931 aa27.55■■■□□ 2
HERC4-212ENST00000505760 IGSF21Q96ID5 467 aa27.55■■■□□ 2
HERC4-212ENST00000505760 NRDE2Q9H7Z3 1164 aa27.55■■■□□ 2
HERC4-212ENST00000505760 MINDY3Q9H8M7 445 aa27.55■■■□□ 2
HERC4-212ENST00000505760 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.54■■■□□ 2
HERC4-212ENST00000505760 ZBTB39O15060 712 aa27.54■■■□□ 2
HERC4-212ENST00000505760 LARGE1O95461 756 aa27.54■■■□□ 2
HERC4-212ENST00000505760 TRIM67Q6ZTA4 783 aa27.54■■■□□ 2
HERC4-212ENST00000505760 FERMT3Q86UX7 667 aa27.54■■■□□ 2
HERC4-212ENST00000505760 RNF149Q8NC42 400 aa27.54■■■□□ 2
HERC4-212ENST00000505760 TNFRSF25Q93038 417 aa27.54■■■□□ 2
HERC4-212ENST00000505760 MTRQ99707 1265 aa27.54■■■□□ 2
HERC4-212ENST00000505760 ZBP1Q9H171 429 aa27.54■■■□□ 2
HERC4-212ENST00000505760 PCDHA12Q9UN75 941 aa27.54■■■□□ 2
HERC4-212ENST00000505760 ZNF318Q5VUA4 2279 aa27.53■■■□□ 2
HERC4-212ENST00000505760 CLASP2O75122 1294 aaKnown RBP27.53■■■□□ 2
HERC4-212ENST00000505760 GALTP07902 379 aa27.53■■■□□ 2
HERC4-212ENST00000505760 ZXDAP98168 799 aa27.53■■■□□ 2
HERC4-212ENST00000505760 TRIM29Q14134 588 aa27.53■■■□□ 2
HERC4-212ENST00000505760 CALCRLQ16602 461 aa27.53■■■□□ 2
HERC4-212ENST00000505760 CES5AQ6NT32 575 aa27.53■■■□□ 2
HERC4-212ENST00000505760 DDX53Q86TM3 631 aaKnown RBP27.53■■■□□ 2
HERC4-212ENST00000505760 KCNH6Q9H252 994 aa27.53■■■□□ 2
HERC4-212ENST00000505760 TMEM221A6NGB7 291 aa27.52■■■□□ 2
HERC4-212ENST00000505760 M0R296 226 aa27.52■■■□□ 2
HERC4-212ENST00000505760 ERLIN2O94905 339 aa27.52■■■□□ 2
HERC4-212ENST00000505760 SLITRK3O94933 977 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms