RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 ME3Q16798 604 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 SRGAP1Q7Z6B7 1085 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 MRPL43Q8N983 215 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 NECAB1Q8N987 351 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 VN1R2Q8NFZ6 395 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 PRPF31Q8WWY3 499 aaKnown RBP13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 GTF3C6Q969F1 213 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 TMEM169Q96HH4 297 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 IFT122Q9HBG6 1241 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 AGPAT5Q9NUQ2 364 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 WRAP73Q9P2S5 460 aaPredicted RBP13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 MUTYHQ9UIF7 546 aa13.48□□□□□ -0.25
PDLIM7-214ENST00000505746 DTNBO60941 627 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 CXCL14O95715 111 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 RBM10P98175 930 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 RNASELQ05823 741 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 LAMTOR4Q0VGL1 99 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 TRIM29Q14134 588 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 CBX2Q14781 532 aaPredicted RBP13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 XKR9Q5GH70 373 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 NOMO2Q5JPE7 1267 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 EARS2Q5JPH6 523 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 ANKRD54Q6NXT1 300 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 TMEM87AQ8NBN3 555 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 SUSD6Q92537 303 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 CASP10Q92851 521 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 LPPQ93052 612 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 TMEM143Q96AN5 459 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 DYDC2Q96IM9 177 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 RGL1Q9NZL6 768 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 PCDHA12Q9UN75 941 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 BRWD1Q9NSI6 2320 aa13.47□□□□□ -0.25
PDLIM7-214ENST00000505746 MYH9P35579 1960 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 C2orf71A6NGG8 1288 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 OFD1O75665 1012 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 SLITRK3O94933 977 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 CA8P35219 290 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 NEK4P51957 841 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 CYP4A11Q02928 519 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 SPIRE1Q08AE8 756 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 GIT2Q14161 759 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 CTTNQ14247 550 aaKnown RBP13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 EMC2Q15006 297 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 PCBP1Q15365 356 aaKnown RBP eCLIP13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 CALCRLQ16602 461 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 LONRF3Q496Y0 759 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 TPRNQ4KMQ1 711 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 LLGL2Q6P1M3 1020 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 URGCPQ8TCY9 931 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 EDAQ92838 391 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 TNFRSF25Q93038 417 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 RPGRIP1Q96KN7 1286 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 MTRQ99707 1265 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 S1PR5Q9H228 398 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 TBC1D13Q9NVG8 400 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 INPP5FQ9Y2H2 1132 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 PCDHB2Q9Y5E7 798 aa13.46□□□□□ -0.25
PDLIM7-214ENST00000505746 EVPLQ92817 2033 aa13.46□□□□□ -0.26
PDLIM7-214ENST00000505746 CNTNAP2Q9UHC6 1331 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 LOXHD1Q8IVV2 1947 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 FAM205CA6NFA0 338 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 BTBD18B2RXH4 712 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 TFDP1Q14186 410 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 MXD4Q14582 209 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 SYCE2Q6PIF2 218 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 MRPL10Q7Z7H8 261 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 DDX53Q86TM3 631 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 FERMT3Q86UX7 667 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 VPS52Q8N1B4 723 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 RNF149Q8NC42 400 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 CNNM3Q8NE01 707 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 NSUN7Q8NE18 718 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 IGSF21Q96ID5 467 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 MFSD14AQ96MC6 490 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 EIF2AK1Q9BQI3 630 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 NRDE2Q9H7Z3 1164 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 ANKEF1Q9NU02 776 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 KANSL3Q9P2N6 904 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 STK39Q9UEW8 545 aa13.45□□□□□ -0.26
PDLIM7-214ENST00000505746 FNDC1Q4ZHG4 1894 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 KIAA1671Q9BY89 1806 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 MEIS3P2A8K0S8 358 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 ZBTB39O15060 712 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 NEMFO60524 1076 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 CLASP2O75122 1294 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 ERLIN2O94905 339 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 LYPLA2O95372 231 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 LARGE1O95461 756 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 ALDH2P05091 517 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 GALTP07902 379 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 HOXA11P31270 313 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 ITIH3Q06033 890 aa13.44□□□□□ -0.26
PDLIM7-214ENST00000505746 CES5AQ6NT32 575 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms