RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 BBXQ8WY36 941 aaPredicted RBP18.39■□□□□ 0.53
LIN54-204ENST00000505397 FIZ1Q96SL8 496 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 MKNK1Q9BUB5 465 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 TMOD4Q9NZQ9 345 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 TTC7AQ9ULT0 858 aaPredicted RBP18.39■□□□□ 0.53
LIN54-204ENST00000505397 PCDHB13Q9Y5F0 798 aa18.39■□□□□ 0.53
LIN54-204ENST00000505397 SLITRK3O94933 977 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 LSP1P33241 339 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 PSMC2P35998 433 aaKnown RBP18.38■□□□□ 0.53
LIN54-204ENST00000505397 HSD17B3P37058 310 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 STAT1P42224 750 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 UAP1Q16222 522 aaPredicted RBP18.38■□□□□ 0.53
LIN54-204ENST00000505397 OTOP1Q7RTM1 612 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 SULF1Q8IWU6 871 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 PAGR1Q9BTK6 254 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 SRRM3A6NNA2 597 aaPredicted RBP18.38■□□□□ 0.53
LIN54-204ENST00000505397 GAS7O60861 476 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 TTC31Q49AM3 519 aaPredicted RBP18.38■□□□□ 0.53
LIN54-204ENST00000505397 NOL9Q5SY16 702 aaKnown RBP18.38■□□□□ 0.53
LIN54-204ENST00000505397 ATG4CQ96DT6 458 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 ZNF577Q9BSK1 485 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 AP1M1Q9BXS5 423 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 EPN3Q9H201 632 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 NEUROG2Q9H2A3 272 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 SLITRK6Q9H5Y7 841 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 EFCC1Q9HA90 598 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 POLD4Q9HCU8 107 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 MAP3K20Q9NYL2 800 aaKnown RBP18.38■□□□□ 0.53
LIN54-204ENST00000505397 NCANO14594 1321 aa18.38■□□□□ 0.53
LIN54-204ENST00000505397 COL11A1P12107 1806 aaPredicted RBP18.38■□□□□ 0.53
LIN54-204ENST00000505397 F8VZ95 297 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 VWA5AO00534 786 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 EVI5O60447 810 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 SOX5P35711 763 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 GALCP54803 685 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 FAM186BQ8IYM0 893 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 SAMD3Q8N6K7 520 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 STK33Q9BYT3 514 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 SFI1A8K8P3 1242 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 PSMD10O75832 226 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.37■□□□□ 0.53
LIN54-204ENST00000505397 U2AF1L4Q8WU68 220 aaKnown RBP18.37■□□□□ 0.53
LIN54-204ENST00000505397 SLC5A5Q92911 643 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 LRRC45Q96CN5 670 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 GPR88Q9GZN0 384 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 DDX47Q9H0S4 455 aaKnown RBP18.37■□□□□ 0.53
LIN54-204ENST00000505397 RABEP2Q9H5N1 569 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 DMAC2Q9NW81 257 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 UBE4BO95155 1302 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 FRMPD4Q14CM0 1322 aa18.37■□□□□ 0.53
LIN54-204ENST00000505397 KRIT1O00522 736 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 CHMP2AO43633 222 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 NMT1P30419 496 aaKnown RBP18.36■□□□□ 0.53
LIN54-204ENST00000505397 ZNF131P52739 623 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 POU5F1Q01860 360 aaKnown RBP18.36■□□□□ 0.53
LIN54-204ENST00000505397 GHRHRQ02643 423 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 PPATQ06203 517 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 PPP2R5CQ13362 524 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 CEP85LQ5SZL2 805 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 WDR11Q9BZH6 1224 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 IKZF4Q9H2S9 585 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 NDUFAB1O14561 156 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 PPP1R37O75864 691 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 ITGA4P13612 1032 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 MDH1P40925 334 aaKnown RBP18.36■□□□□ 0.53
LIN54-204ENST00000505397 FMO5P49326 533 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 GUCY1A3Q02108 690 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 CTTNQ14247 550 aaKnown RBP18.36■□□□□ 0.53
LIN54-204ENST00000505397 HLTFQ14527 1009 aaKnown RBP eCLIP18.36■□□□□ 0.53
LIN54-204ENST00000505397 C9orf131Q5VYM1 1079 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 B4GALNT4Q76KP1 1039 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 DAAM2Q86T65 1068 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 DDX42Q86XP3 938 aaKnown RBP eCLIP18.36■□□□□ 0.53
LIN54-204ENST00000505397 PIGOQ8TEQ8 1089 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 MXRA8Q9BRK3 442 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 RPTORQ8N122 1335 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 TMCO5BA8MYB1 307 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 FAM13AO94988 1023 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 TMEM253P0C7T8 217 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 YBX3P16989 372 aaKnown RBP eCLIP18.36■□□□□ 0.537e-8■□□□□ 10.3
LIN54-204ENST00000505397 MUTP22033 750 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 PTGISQ16647 500 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 SPATS2Q86XZ4 545 aaKnown RBP18.36■□□□□ 0.53
LIN54-204ENST00000505397 MYCT1Q8N699 235 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 TEKT3Q9BXF9 490 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 PARVGQ9HBI0 331 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 COL20A1Q9P218 1284 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 SEL1LQ9UBV2 794 aa18.36■□□□□ 0.53
LIN54-204ENST00000505397 PPP1R12BO60237 982 aaPredicted RBP18.35■□□□□ 0.53
LIN54-204ENST00000505397 PTPROQ16827 1216 aa18.35■□□□□ 0.53
LIN54-204ENST00000505397 ZC2HC1CQ53FD0 456 aaPredicted RBP18.35■□□□□ 0.53
LIN54-204ENST00000505397 ZNF720Q7Z2F6 126 aa18.35■□□□□ 0.53
LIN54-204ENST00000505397 MAATS1Q7Z4T9 603 aa18.35■□□□□ 0.53
LIN54-204ENST00000505397 SYTL5Q8TDW5 730 aaPredicted RBP18.35■□□□□ 0.53
LIN54-204ENST00000505397 DAAM1Q9Y4D1 1078 aa18.35■□□□□ 0.53
LIN54-204ENST00000505397 SAMM50Q9Y512 469 aa18.35■□□□□ 0.53
LIN54-204ENST00000505397 RLFQ13129 1914 aa18.35■□□□□ 0.53
LIN54-204ENST00000505397 RPS6P62753 249 aaKnown RBP18.35■□□□□ 0.53
LIN54-204ENST00000505397 COG2Q14746 738 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms