RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PLSCR1O15162 318 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 NPHP1O15259 732 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 TP53P04637 393 aaPredicted RBP4.95□□□□□ -1.62
RFC1-208ENST00000504849 VCAM1P19320 739 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 MCM7P33993 719 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 HSPA1LP34931 641 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 GRIA2P42262 883 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 DGCR2P98153 550 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 TCIRG1Q13488 830 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 PTPN21Q16825 1174 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 IQSEC1Q6DN90 963 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 ZCCHC8Q6NZY4 707 aaKnown RBP4.95□□□□□ -1.62
RFC1-208ENST00000504849 STK32CQ86UX6 486 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 HSCBQ8IWL3 235 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 TRIM59Q8IWR1 403 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 TRMT2AQ8IZ69 625 aaKnown RBP4.95□□□□□ -1.62
RFC1-208ENST00000504849 ENAHQ8N8S7 591 aaPredicted RBP4.95□□□□□ -1.62
RFC1-208ENST00000504849 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
RFC1-208ENST00000504849 CHMP5Q9NZZ3 219 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 RGS17Q9UGC6 210 aaPredicted RBP4.95□□□□□ -1.62
RFC1-208ENST00000504849 YEATS2Q9ULM3 1422 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 ABCA8O94911 1581 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 GLI2P10070 1586 aa4.95□□□□□ -1.62
RFC1-208ENST00000504849 WDR7Q9Y4E6 1490 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 IQGAP3Q86VI3 1631 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 DUOX2Q9NRD8 1548 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 A0A087WZG4 1122 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 C9IYK1 514 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 AQP7O14520 342 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 DLX3O60479 287 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 ULK1O75385 1050 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 PRKD3O94806 890 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 GSNP06396 782 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 TPM2P07951 284 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 ZNF28P17035 718 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 CCND1P24385 295 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 RECQLP46063 649 aaPredicted RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 ITGA1P56199 1179 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 SETQ01105 290 aaPredicted RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 OCRLQ01968 901 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 SAFBQ15424 915 aaKnown RBP eCLIP4.94□□□□□ -1.62
RFC1-208ENST00000504849 INAVAQ3KP66 663 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 TDRD10Q5VZ19 366 aaKnown RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 SLFN13Q68D06 897 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 ADAT2Q7Z6V5 191 aaKnown RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 DDX53Q86TM3 631 aaKnown RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 CCDC144CPQ8IYA2 1237 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 CPA6Q8N4T0 437 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 FAM26EQ8N5C1 309 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 ANP32BQ92688 251 aaKnown RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 TRIM44Q96DX7 344 aaPredicted RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 AIFM3Q96NN9 605 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 STRBPQ96SI9 672 aaKnown RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 ELAC2Q9BQ52 826 aaKnown RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.94□□□□□ -1.62
RFC1-208ENST00000504849 PRR13Q9NZ81 148 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 POGKQ9P215 609 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 ZNF69Q9UC07 566 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 EMC9Q9Y3B6 208 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 SHROOM2Q13796 1616 aa4.94□□□□□ -1.62
RFC1-208ENST00000504849 FSD2A1L4K1 749 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 TCEA3O75764 348 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 COL6A1P12109 1028 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 HOXC12P31275 282 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 ID4P47928 161 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 LSSP48449 732 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 ZNF280AP59817 542 aaPredicted RBP4.93□□□□□ -1.62
RFC1-208ENST00000504849 PTH1RQ03431 593 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 KRT72Q14CN4 511 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
RFC1-208ENST00000504849 FAM83BQ5T0W9 1011 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 PIK3R6Q5UE93 754 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 IL31Q6EBC2 164 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 ERAP2Q6P179 960 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 TOGARAM2Q6ZUX3 1019 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 BHLHA9Q7RTU4 235 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 MORC1Q86VD1 984 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 SKAP1Q86WV1 359 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 TPH2Q8IWU9 490 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 SMAP1Q8IYB5 467 aaPredicted RBP4.93□□□□□ -1.62
RFC1-208ENST00000504849 CBARPQ8N350 705 aaPredicted RBP4.93□□□□□ -1.62
RFC1-208ENST00000504849 ARHGEF39Q8N4T4 335 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 PAF1Q8N7H5 531 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 TTLL6Q8N841 843 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 NETO2Q8NC67 525 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 MYRIPQ8NFW9 859 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 NEU4Q8WWR8 484 aaPredicted RBP4.93□□□□□ -1.62
RFC1-208ENST00000504849 CLIP3Q96DZ5 547 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 PEX11GQ96HA9 241 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 FUBP3Q96I24 572 aaKnown RBP eCLIP4.93□□□□□ -1.62
RFC1-208ENST00000504849 PKNOX2Q96KN3 472 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 FGD4Q96M96 766 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 GBP4Q96PP9 640 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 MAN1C1Q9NR34 630 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 FBXO9Q9UK97 447 aaPredicted RBP4.93□□□□□ -1.62
RFC1-208ENST00000504849 AKT3Q9Y243 479 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 PCDHB12Q9Y5F1 795 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 PREX2Q70Z35 1606 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 ATP10BO94823 1461 aa4.93□□□□□ -1.62
RFC1-208ENST00000504849 MAGI2Q86UL8 1455 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms