RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 FBXO38Q6PIJ6 1188 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 MOXD1Q6UVY6 613 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 EIF3CQ99613 913 aaKnown RBP15.17■□□□□ 0.02
TCOF1-207ENST00000504761 PXMP2Q9NR77 195 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 GPRC5DQ9NZD1 345 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 STIM2Q9P246 746 aa15.17■□□□□ 0.02
TCOF1-207ENST00000504761 PFASO15067 1338 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 LRRD1A4D1F6 860 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 ONECUT3O60422 494 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-207ENST00000504761 FGGP02679 453 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 PLEKP08567 350 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-207ENST00000504761 PLTPP55058 493 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 GABPAQ06546 454 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 SCFD2Q8WU76 684 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.16■□□□□ 0.02
TCOF1-207ENST00000504761 GPC3P51654 580 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 ARPP19P56211 112 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 SURF1Q15526 300 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 KCTD16Q68DU8 428 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 ERICH1Q86X53 443 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 KIAA0895Q8NCT3 520 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 NLGN2Q8NFZ4 835 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 MAIP1Q8WWC4 291 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 PPANQ9NQ55 473 aaKnown RBP15.16■□□□□ 0.02
TCOF1-207ENST00000504761 MEIS2O14770 477 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 CETPP11597 493 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 COPB2P35606 906 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 PPFIA1Q13136 1202 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 C10orf76Q5T2E6 689 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 PI4K2AQ9BTU6 479 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 BLOC1S4Q9NUP1 217 aa15.16■□□□□ 0.02
TCOF1-207ENST00000504761 ATP1A1P05023 1023 aaKnown RBP15.15■□□□□ 0.02
TCOF1-207ENST00000504761 CLCN6P51797 869 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 IL17AQ16552 155 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 SGO2Q562F6 1265 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 MICALCLQ6ZW33 695 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 SCFD1Q8WVM8 642 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 GPRASP2Q96D09 838 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 TSNARE1Q96NA8 513 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 SMARCAD1Q9H4L7 1026 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 MRPL47Q9HD33 250 aaKnown RBP15.15■□□□□ 0.02
TCOF1-207ENST00000504761 AGPAT3Q9NRZ7 376 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 GINM1Q9NU53 330 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 USP20Q9Y2K6 914 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 ASTN2O75129 1339 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-207ENST00000504761 VIMP08670 466 aaKnown RBP15.15■□□□□ 0.02
TCOF1-207ENST00000504761 DSG3P32926 999 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 SOX5P35711 763 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 ATP1A2P50993 1020 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 DENND2CQ68D51 928 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 CBWD1Q9BRT8 395 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 HEMGNQ9BXL5 484 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 SPATC1LQ9H0A9 340 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 DAAM1Q9Y4D1 1078 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 HERVK_113P62684 666 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 WDR72Q3MJ13 1102 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 SH3BP5LQ7L8J4 393 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 TRIM50Q86XT4 487 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 GLIS3Q8NEA6 775 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 HAUS1Q96CS2 278 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 PARK7Q99497 189 aaKnown RBP15.15■□□□□ 0.02
TCOF1-207ENST00000504761 C2orf40Q9H1Z8 148 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 NGRNQ9NPE2 291 aaKnown RBP15.15■□□□□ 0.02
TCOF1-207ENST00000504761 CALCOCO1Q9P1Z2 691 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 ZNF142P52746 1687 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-207ENST00000504761 CTSHP09668 335 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 CYP2C8P10632 490 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 BMP6P22004 513 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 VGLL4Q14135 290 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 Q4G0T1 1027 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 KCNV1Q6PIU1 500 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 SLC30A5Q8TAD4 765 aa15.15■□□□□ 0.02
TCOF1-207ENST00000504761 CHORDC1Q9UHD1 332 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-207ENST00000504761 H7C0C1 242 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 ATP5OP48047 213 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 SARSP49591 514 aaKnown RBP15.14■□□□□ 0.01
TCOF1-207ENST00000504761 PGM5Q15124 567 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 EPC2Q52LR7 807 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 CTAGE3PQ8IX95 158 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 NME8Q8N427 588 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 FAM81BQ96LP2 452 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 EVI5O60447 810 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 CSDE1O75534 798 aaKnown RBP15.14■□□□□ 0.01
TCOF1-207ENST00000504761 KRT15P19012 456 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 DUOXA2Q1HG44 320 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 HAS1Q92839 578 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 VPS33BQ9H267 617 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 KCND2Q9NZV8 630 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 SLITRK3O94933 977 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 KRT1P04264 644 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 ZNF18P17022 549 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 GPC5P78333 572 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 CLUL1Q15846 466 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 EFCAB12Q6NXP0 572 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 RUFY4Q6ZNE9 571 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 OTOP1Q7RTM1 612 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 TRIM11Q96F44 468 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 NKIRAS1Q9NYS0 192 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 SEPT10Q9P0V9 454 aa15.14■□□□□ 0.01
TCOF1-207ENST00000504761 CENPPQ6IPU0 288 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms