RNA–Protein interactions for RNA: ENST00000504616.1

AP003478.1-201, humanhuman

BASIC

Gene AP003478.1, Length 833 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003478.1-201ENST00000504616 DNAJB1P25685 340 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 U2AF2P26368 475 aaKnown RBP eCLIP11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 GJB2P29033 226 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 IRS1P35568 1242 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 PBX3P40426 434 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 MCM2P49736 904 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 RAB27AP51159 221 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 HYAL1Q12794 435 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 MXD4Q14582 209 aaPredicted RBP11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 LEXMQ3ZCV2 418 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 HAUS3Q68CZ6 603 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 POTEGQ6S5H5 508 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 MAEAQ7L5Y9 396 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 CATSPER3Q86XQ3 398 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 LPPQ93052 612 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 ZNF558Q96NG5 402 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 MRPL9Q9BYD2 267 aaKnown RBP11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 CWH43Q9H720 699 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 MINDY3Q9H8M7 445 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 XPNPEP1Q9NQW7 623 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 TLR9Q9NR96 1032 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 FAM105AQ9NUU6 356 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 INPP5FQ9Y2H2 1132 aa11.64□□□□□ -0.55
AP003478.1-201ENST00000504616 INO80B-WBP1J3KQ70 363 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 NCK2O43639 380 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 SPATA31C1P0DKV0 1188 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 GTF2F1P35269 517 aaKnown RBP eCLIP11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 PPM1AP35813 382 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 CCT6AP40227 531 aaKnown RBP11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 UBE3AQ05086 875 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 CAPSQ13938 189 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 CAMK1Q14012 370 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 CLUL1Q15846 466 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 PTCRAQ6ISU1 281 aaPredicted RBP11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 KCNT2Q6UVM3 1135 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 GLB1LQ6UWU2 654 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 LRRC55Q6ZSA7 311 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 ADGRD2Q7Z7M1 963 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 RBM23Q86U06 439 aaKnown RBP11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 ZNF598Q86UK7 904 aaKnown RBP11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 ASAP3Q8TDY4 903 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 NACC1Q96RE7 527 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 POLR3FQ9H1D9 316 aaPredicted RBP11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 SMC3Q9UQE7 1217 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 PCDHB6Q9Y5E3 794 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 PCDHGC5Q9Y5F6 944 aa11.63□□□□□ -0.55
AP003478.1-201ENST00000504616 ARHGEF35A5YM69 484 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 LRRIQ4A6NIV6 560 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 ZC3H11AO75152 810 aaKnown RBP eCLIP11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 XRCC6P12956 609 aaKnown RBP eCLIP11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 IL9P15248 144 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 RPA1P27694 616 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 CA8P35219 290 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 NRIP1P48552 1158 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 NDUFV1P49821 464 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 PTENP60484 403 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 RNASELQ05823 741 aaKnown RBP11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 NCBP1Q09161 790 aaKnown RBP11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 PTGDRQ13258 359 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 PLPP4Q5VZY2 271 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 MCPH1Q8NEM0 835 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 PGBD4Q96DM1 585 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 POLR3CQ9BUI4 534 aaPredicted RBP11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 TRAIPQ9BWF2 469 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 RAB34Q9BZG1 259 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 GBP3Q9H0R5 595 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 GPRC5CQ9NQ84 441 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 ENTPD7Q9NQZ7 604 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 LRWD1Q9UFC0 647 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 PUF60Q9UHX1 559 aaKnown RBP11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 FAM50BQ9Y247 325 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 PCDHB2Q9Y5E7 798 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 TTC28Q96AY4 2481 aa11.62□□□□□ -0.55
AP003478.1-201ENST00000504616 MEIS3P2A8K0S8 358 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 LINC01565O15544 149 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 TSPAN1O60635 241 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 TBX10O75333 385 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 GLRA2P23416 452 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 ARL2P36404 184 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 ALDH7A1P49419 539 aaKnown RBP11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 TOB1P50616 345 aaPredicted RBP11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 KRT17Q04695 432 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 PUS10Q3MIT2 529 aaKnown RBP11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 NOMO2Q5JPE7 1267 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 NOTUMQ6P988 496 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 URGCPQ8TCY9 931 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 SNX29Q8TEQ0 813 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 MRPS27Q92552 414 aaKnown RBP11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 CPB2Q96IY4 423 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 TCF25Q9BQ70 676 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 TRIM6Q9C030 488 aaPredicted RBP11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 TLE6Q9H808 572 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 SPG21Q9NZD8 308 aa11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 DBR1Q9UK59 544 aaKnown RBP11.61□□□□□ -0.55
AP003478.1-201ENST00000504616 TDRD15B5MCY1 1934 aaKnown RBP11.6□□□□□ -0.55
AP003478.1-201ENST00000504616 C5orf42Q9H799 3197 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms