RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 ASAP2O43150 1006 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 COL9A1P20849 921 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 MCM2P49736 904 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 UBE3AQ05086 875 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 POTEGQ6S5H5 508 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 ABI1Q8IZP0 508 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 HELQQ8TDG4 1101 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 FAM105AQ9NUU6 356 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 PRKAG3Q9UGI9 489 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 PCDHB6Q9Y5E3 794 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 PCDHB12Q9Y5F1 795 aa20.35■□□□□ 0.85
RNF4-204ENST00000503659 FGF18O76093 207 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 XRCC6P12956 609 aaKnown RBP eCLIP20.34■□□□□ 0.85
RNF4-204ENST00000503659 IL9P15248 144 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 LAG3P18627 525 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 RPA1P27694 616 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 GJB2P29033 226 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 HOXA11P31270 313 aaPredicted RBP20.34■□□□□ 0.85
RNF4-204ENST00000503659 ARL2P36404 184 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 LTBRP36941 435 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 FXR2P51116 673 aaKnown RBP eCLIP20.34■□□□□ 0.85
RNF4-204ENST00000503659 CAPSQ13938 189 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 MXD4Q14582 209 aaPredicted RBP20.34■□□□□ 0.85
RNF4-204ENST00000503659 EP400NLQ6ZTU2 488 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 GJD3Q8N144 294 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 LPPQ93052 612 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 CCDC43Q96MW1 224 aaKnown RBP20.34■□□□□ 0.85
RNF4-204ENST00000503659 KIF3AQ9Y496 699 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 PCDHGC5Q9Y5F6 944 aa20.34■□□□□ 0.85
RNF4-204ENST00000503659 MEIS3P2A8K0S8 358 aa20.33■□□□□ 0.85
RNF4-204ENST00000503659 USO1O60763 962 aaKnown RBP20.33■□□□□ 0.85
RNF4-204ENST00000503659 GLRA2P23416 452 aa20.33■□□□□ 0.85
RNF4-204ENST00000503659 GTF2F1P35269 517 aaKnown RBP eCLIP20.33■□□□□ 0.85
RNF4-204ENST00000503659 PBX3P40426 434 aa20.33■□□□□ 0.85
RNF4-204ENST00000503659 PTENP60484 403 aa20.33■□□□□ 0.85
RNF4-204ENST00000503659 PTGDRQ13258 359 aa20.33■□□□□ 0.85
RNF4-204ENST00000503659 UBXN11Q5T124 520 aa20.33■□□□□ 0.85
RNF4-204ENST00000503659 ADGRD2Q7Z7M1 963 aa20.33■□□□□ 0.85
RNF4-204ENST00000503659 IFNLR1Q8IU57 520 aaPredicted RBP20.33■□□□□ 0.85
RNF4-204ENST00000503659 DBR1Q9UK59 544 aaKnown RBP20.33■□□□□ 0.85
RNF4-204ENST00000503659 PI4K2BG5E9Z4 385 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 ZNF623O75123 536 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 SKIP12755 728 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 RAB27AP51159 221 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 POU5F1BQ06416 359 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 ECM1Q16610 540 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 LONRF3Q496Y0 759 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 KCNT2Q6UVM3 1135 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 THNSL1Q8IYQ7 743 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 ERMNQ8TAM6 284 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 NACC1Q96RE7 527 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 POLR3FQ9H1D9 316 aaPredicted RBP20.32■□□□□ 0.84
RNF4-204ENST00000503659 EPHX3Q9H6B9 360 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 CD320Q9NPF0 282 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 GPRC5CQ9NQ84 441 aa20.32■□□□□ 0.84
RNF4-204ENST00000503659 FSD2A1L4K1 749 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 TSPAN1O60635 241 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 MBTD1Q05BQ5 628 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 ADAM15Q13444 863 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 TFDP1Q14186 410 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 HAUS3Q68CZ6 603 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 PDE12Q6L8Q7 609 aaKnown RBP20.31■□□□□ 0.84
RNF4-204ENST00000503659 IGSF22Q8N9C0 903 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 RSPH1Q8WYR4 309 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 ZNF558Q96NG5 402 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 TLR9Q9NR96 1032 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.31■□□□□ 0.84
RNF4-204ENST00000503659 PCDHB2Q9Y5E7 798 aa20.31■□□□□ 0.84
RNF4-204ENST00000503659 LINC01565O15544 149 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 TBX10O75333 385 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 SSTR3P32745 418 aaPredicted RBP20.3■□□□□ 0.84
RNF4-204ENST00000503659 ERVFC1P60507 584 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 PLCB3Q01970 1234 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 DLX2Q07687 328 aaPredicted RBP20.3■□□□□ 0.84
RNF4-204ENST00000503659 IL17AQ16552 155 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 AMHR2Q16671 573 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 MCTP1Q6DN14 999 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 EFHBQ8N7U6 833 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 MRPL9Q9BYD2 267 aaKnown RBP20.3■□□□□ 0.84
RNF4-204ENST00000503659 NFKBIZQ9BYH8 718 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 LZTS1Q9Y250 596 aa20.3■□□□□ 0.84
RNF4-204ENST00000503659 C5orf42Q9H799 3197 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 INO80B-WBP1J3KQ70 363 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 FSCN2O14926 492 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 GPR37L1O60883 481 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 OFD1O75665 1012 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 ERLIN2O94905 339 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 MUTP22033 750 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 SMAD4Q13485 552 aaKnown RBP20.29■□□□□ 0.84
RNF4-204ENST00000503659 PCBP1Q15365 356 aaKnown RBP eCLIP20.29■□□□□ 0.84
RNF4-204ENST00000503659 SMAD2Q15796 467 aaKnown RBP20.29■□□□□ 0.84
RNF4-204ENST00000503659 TMEM31Q5JXX7 168 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 GLB1LQ6UWU2 654 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 AGMOQ6ZNB7 445 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 MAEAQ7L5Y9 396 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 MRPL10Q7Z7H8 261 aaKnown RBP20.29■□□□□ 0.84
RNF4-204ENST00000503659 SLC39A11Q8N1S5 342 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 MCPH1Q8NEM0 835 aa20.29■□□□□ 0.84
RNF4-204ENST00000503659 MRPS27Q92552 414 aaKnown RBP20.29■□□□□ 0.84
RNF4-204ENST00000503659 BACH2Q9BYV9 841 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms