RNA–Protein interactions for RNA: ENST00000503407.5

ACSL1-203, Transcript of acyl-CoA synthetase long chain family member 1, human

TSL 2

Gene ACSL1, Length 2,409 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSL1-203	ENST00000503407	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.96	□□□□□ -0.49
ACSL1-203	ENST00000503407	BZW2	Q9Y6E2	419 aa	Known RBP	11.96	□□□□□ -0.49
ACSL1-203	ENST00000503407	DLEC1	Q9Y238	1755 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	ATAD5	Q96QE3	1844 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	PENK	P01210	267 aa	Predicted RBP	11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	FGFR4	P22455	802 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	NPEPPS	P55786	919 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	SETDB1	Q15047	1291 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	PUM3	Q15397	648 aa	Known RBP	11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	INF2	Q27J81	1249 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	DPY19L2	Q6NUT2	758 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	BICDL1	Q6ZP65	573 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	SV2B	Q7L1I2	683 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	TBC1D10A	Q9BXI6	508 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	PPP1R12C	Q9BZL4	782 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	GAN	Q9H2C0	597 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	SH3GLB2	Q9NR46	395 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	PDP2	Q9P2J9	529 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	HAO1	Q9UJM8	370 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	ATP8B3	O60423	1300 aa		11.96	□□□□□ -0.5
ACSL1-203	ENST00000503407	UBR3	Q6ZT12	1888 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MAGEA13P	A6NCF6	341 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	SMIM22	K7EJ46	135 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	ECE2	O60344	883 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	RARG	P13631	454 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	CREB1	P16220	341 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	KCNA3	P22001	575 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	TARS	P26639	723 aa	Known RBP	11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	FKBP3	Q00688	224 aa	Known RBP	11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MAPK7	Q13164	816 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	DNAAF5	Q86Y56	855 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	ARHGAP18	Q8N392	663 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	ANKRD42	Q8N9B4	389 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MIGA1	Q8NAN2	632 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	GDAP1	Q8TB36	358 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	LRRC8C	Q8TDW0	803 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	GBP5	Q96PP8	586 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	OCEL1	Q9H607	264 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	USP40	Q9NVE5	1235 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	PARP2	Q9UGN5	583 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	BLOC1S6	Q9UL45	172 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	DUOX1	Q9NRD9	1551 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MYMK	A6NI61	221 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	ATP9A	O75110	1047 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	ENTPD5	O75356	428 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	TPP2	P29144	1249 aa	Predicted RBP	11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	HOXA7	P31268	230 aa	Predicted RBP	11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	SCNN1B	P51168	640 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	OCRL	Q01968	901 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MTA1	Q13330	715 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	OTUD6A	Q7L8S5	288 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	LCA5	Q86VQ0	697 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MIPOL1	Q8TD10	442 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	NCSTN	Q92542	709 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	GATA6	Q92908	595 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	ERP27	Q96DN0	273 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MAGEB18	Q96M61	343 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	ERVK-5	Q9HDB9	667 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	MLXIPL	Q9NP71	852 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	KCNK9	Q9NPC2	374 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	PCDHA6	Q9UN73	950 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	PCDHA8	Q9Y5H6	950 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	SLC4A7	Q9Y6M7	1214 aa		11.95	□□□□□ -0.5
ACSL1-203	ENST00000503407	TRAF5	O00463	557 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	TJP3	O95049	919 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	H2AFZ	P0C0S5	128 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	OR52Z1	P0C646	297 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	FGFR2	P21802	821 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	EPHB2	P29323	1055 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	ATP5D	P30049	168 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	COPB2	P35606	906 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	SERPINB4	P48594	390 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	RASSF2	P50749	326 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	POLG	P54098	1239 aa	Predicted RBP	11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	YARS	P54577	528 aa	Known RBP	11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	RASGRF1	Q13972	1273 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	H2AFV	Q71UI9	128 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	CCNJL	Q8IV13	435 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	SYCP3	Q8IZU3	236 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	SDR42E1	Q8WUS8	393 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	CALML4	Q96GE6	196 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	RUNDC3B	Q96NL0	473 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	CRAMP1	Q96RY5	1269 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	TMCO1	Q9UM00	188 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	NENF	Q9UMX5	172 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	PITPNM2	Q9BZ72	1349 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	APBA3	O96018	575 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	STX2	P32856	288 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	RPL21	P46778	160 aa	Known RBP	11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	PRPF4B	Q13523	1007 aa	Known RBP	11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	ZCWPW2	Q504Y3	356 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	ACBD5	Q5T8D3	534 aa	Predicted RBP	11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	DCAF12L1	Q5VU92	463 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	SUSD4	Q5VX71	490 aa		11.94	□□□□□ -0.5
ACSL1-203	ENST00000503407	DYM	Q7RTS9	669 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms